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BioLiP
>protein
LEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF

The query sequence (length=43) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8dye:B 43 43 1.0000 1.0000 1.0000 5.42e-26 8dyd:C
2 7vg3:A 860 13 0.1628 0.0081 0.5385 5.6 7vg2:A
3 2jbs:D 400 32 0.2791 0.0300 0.3750 6.8 2jbs:A, 2jbs:B, 2jbs:C, 2jbt:A, 2jbt:D, 2jbt:B, 2jbt:C
4 3i3w:A 441 33 0.3023 0.0295 0.3939 6.8 3i3w:B
5 6o9l:A 1476 44 0.3256 0.0095 0.3182 7.6 8a40:A, 8bvw:A, 8byq:A, 8bz1:A, 7edx:o, 7eg7:o, 7eg8:o, 7eg9:o, 7ega:o, 7egb:o, 7egc:o, 6exv:A, 5flm:A, 5iy6:A, 5iy7:A, 5iy8:A, 5iy9:A, 5iya:A, 5iyb:A, 5iyc:A, 5iyd:A, 7nvr:A, 7nvs:A, 7nvt:A, 7nvu:A, 7nvy:A, 7nvz:A, 7nw0:A, 8s5n:A, 8wak:o, 8wal:o, 8wan:o, 8wao:o, 8wap:o, 8waq:o, 8war:o, 8was:o, 8wat:o, 8wau:o, 8wav:o, 8waw:o, 8wax:o, 8way:o, 8waz:o, 8wb0:o, 6xre:A, 7zwd:A, 7zx7:A, 7zx8:A
6 8a3y:A 1426 44 0.3256 0.0098 0.3182 8.4 8oeu:A, 8oev:A, 8oew:A, 8of0:A, 7okx:A, 7oky:A, 7ol0:A, 7pks:A, 8rbx:A, 6ted:A, 8uhg:A, 8ui0:A, 7unc:A, 7und:A
7 7ena:PA 1475 44 0.3256 0.0095 0.3182 8.9 7b0y:A, 8b3d:A, 8b3f:A, 7enc:PA, 6gmh:A, 6gml:A, 8gxq:PA, 8gxs:PA, 7lbm:A, 5oik:A, 7oo3:A, 7oob:A, 7oop:A, 7opc:A, 7opd:A, 8p4a:A, 8p4b:A, 8p4c:A, 8p4d:A, 8p4e:A, 8p4f:A, 8s51:A, 8s52:A, 8s54:A, 8s55:A, 8uha:A, 8uhd:A, 8uis:A, 8w8e:A, 8w8f:A, 7ycx:1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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