Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KWDYDLRCGEYTLNLNEKTLIMGILNVTPSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTVSVEEEIKRVVPMIQAV
SKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKI
AKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGC
EFVRVHDVKEMSRMAKMMDAMIGK

The query sequence (length=264) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3h2a:B 277 264 0.9924 0.9458 0.9924 0.0 4d8a:A, 4d8a:B, 4d8z:A, 4d8z:B, 4d9p:A, 4d9p:B, 4daf:A, 4daf:B, 4dai:A, 4dai:B, 4db7:A, 4db7:B, 3h21:A, 3h21:B, 3h22:A, 3h22:B, 3h23:A, 3h23:B, 3h24:A, 3h24:B, 3h26:A, 3h26:B, 3h2a:A, 3h2c:A, 3h2c:B, 3h2e:B, 3h2f:A, 3h2f:B, 3h2m:A, 3h2m:B, 3h2n:A, 3h2n:B, 3h2o:A, 3h2o:B, 4nil:A, 4nir:A, 4nir:B, 4nl1:A, 4nl1:B, 1tww:A, 1tww:B, 1twz:A, 1twz:B, 1tx0:A, 1tx0:B, 1tx2:A, 1tx2:B, 3tya:A, 3tya:B, 3tyb:A, 3tyb:B, 3tyc:A, 3tyc:B, 3tyd:A, 3tyd:B, 3tye:A, 3tye:B
2 6pz2:A 263 262 0.4886 0.4905 0.4924 2.90e-85
3 1aj0:A 282 258 0.3864 0.3617 0.3953 1.09e-56 1aj2:A, 7tq1:A, 7tq1:B, 5u0v:A, 5u0w:A, 5u0w:B, 5u0y:A, 5u0y:B, 5u0z:A, 5u0z:B, 5u10:A, 5u10:B, 5u11:A, 5u11:B, 5u12:A, 5u12:B, 5u13:A, 5u13:B, 5u14:A, 5u14:B, 5v79:A, 5v79:B, 5v7a:A, 5v7a:B
4 3tyz:B 276 255 0.3902 0.3732 0.4039 6.16e-56 5jq9:A, 5jq9:B, 3tyu:A, 3tyz:A, 3tzf:A, 3tzf:B
5 6clv:C 257 253 0.4205 0.4319 0.4387 9.41e-56 1ad4:A, 6clv:A, 6clv:B
6 6day:D 273 255 0.3864 0.3736 0.4000 8.92e-54 6day:A, 6day:B, 6day:C, 6ofw:A, 6ofw:B, 6q62:A, 6q62:C, 6q62:D, 6q62:B
7 6omz:A 274 263 0.3902 0.3759 0.3916 1.09e-49
8 8d5h:B 274 266 0.3750 0.3613 0.3722 5.34e-49 8d5g:A, 8d5g:B, 8d5h:A, 8d5i:A, 8d5i:B
9 1eye:A 256 260 0.3674 0.3789 0.3731 3.74e-47
10 2dza:B 257 257 0.3674 0.3774 0.3774 6.75e-45 2dzb:A, 2dzb:B
11 3tyu:B 238 239 0.3295 0.3655 0.3640 6.34e-44
12 5u0v:B 249 243 0.3523 0.3735 0.3827 6.58e-43
13 3tr9:A 277 244 0.3295 0.3141 0.3566 3.41e-41 3tr9:B, 3tr9:C, 3tr9:D
14 8scd:A 264 261 0.3485 0.3485 0.3525 4.15e-40 7s2m:A, 7s2m:B, 7s2m:C
15 2y5s:B 281 264 0.3636 0.3416 0.3636 1.28e-39 2y5s:A
16 2bmb:A 513 316 0.4091 0.2105 0.3418 2.68e-38
17 6ucz:B 265 254 0.3598 0.3585 0.3740 4.44e-35 6ucz:A
18 2vef:A 279 273 0.3788 0.3584 0.3663 1.20e-34 2veg:A
19 6jwz:B 565 265 0.3409 0.1593 0.3396 1.60e-28 6jwr:A, 6jwr:B, 6jwv:A, 6jww:A, 6jww:B, 6jwx:A, 6jwy:A, 6kcl:A, 6kcm:A
20 7s2i:A 264 243 0.2803 0.2803 0.3045 2.03e-28 7s2i:B
21 7s2k:A 268 217 0.2765 0.2724 0.3364 3.27e-27 7s2k:B
22 6jwq:B 590 283 0.3409 0.1525 0.3180 1.02e-25 6jwq:A, 6jws:A, 6jws:B, 6jwt:A, 6jwt:B, 6jwu:A, 6jwz:A, 6kck:A, 6kck:B, 6kcm:B
23 6kcl:B 545 253 0.3220 0.1560 0.3360 2.13e-25 6jwu:B, 6jwv:B, 6jwx:B, 6jwy:B
24 5z79:B 562 279 0.3258 0.1530 0.3082 1.66e-24
25 5z79:C 599 292 0.3258 0.1436 0.2945 7.39e-23 5z79:A, 5z79:D, 5z79:E, 5z79:F
26 3mcm:A 368 229 0.2538 0.1821 0.2926 6.42e-12 3mcn:A
27 3mco:A 397 237 0.2652 0.1763 0.2954 2.49e-11 3mcn:B, 3mco:B
28 8sl9:A 422 248 0.2727 0.1706 0.2903 3.29e-11 4pzv:A
29 8g3h:A 841 183 0.1780 0.0559 0.2568 0.47
30 6vxe:A 789 112 0.1212 0.0406 0.2857 0.99 6vxe:B, 6vxe:C, 6vxe:D, 6vxe:E, 6vxe:F, 6vxe:G, 6vxe:H
31 6vpb:B 324 60 0.0720 0.0586 0.3167 0.99
32 7udj:H 192 98 0.1098 0.1510 0.2959 2.1
33 7xh4:A 177 100 0.1061 0.1582 0.2800 2.1 7xh2:A
34 3t7v:A 337 67 0.0720 0.0564 0.2836 2.3
35 3c0o:A 450 40 0.0455 0.0267 0.3000 2.6 3c0o:B
36 3ho8:D 934 74 0.0909 0.0257 0.3243 3.1
37 3bg5:B 1074 74 0.0909 0.0223 0.3243 3.4 3bg5:D, 8gk8:C, 3hb9:B, 3hb9:D, 3hbl:B, 3hbl:D, 4hnt:B, 4hnt:D, 4hnu:B, 4hnu:D, 4hnv:D, 3ho8:A, 3ho8:C, 3ho8:B
38 3bg5:A 1137 74 0.0909 0.0211 0.3243 3.7 3bg5:C, 8gk8:A, 8gk8:B, 3hb9:A, 3hb9:C, 3hbl:A, 3hbl:C, 4hnt:A, 4hnt:C, 4hnu:A, 4hnu:C, 4hnv:A, 4hnv:C
39 4hnv:B 1033 74 0.0909 0.0232 0.3243 3.7 8gk8:D
40 6xyw:Bb 281 107 0.1023 0.0961 0.2523 5.3
41 8vpo:A 448 37 0.0455 0.0268 0.3243 5.6
42 5diy:A 463 72 0.0795 0.0454 0.2917 6.1 5diy:B
43 3vyt:C 336 116 0.1136 0.0893 0.2586 6.3 3vys:C, 3wjp:A, 3wjq:A, 3wjr:A
44 7qty:A 279 17 0.0455 0.0430 0.7059 8.2 7qu0:A
45 8xd5:A 419 61 0.0644 0.0406 0.2787 8.5 8hho:A, 8hiq:A, 8hiz:A, 8hj9:A, 8xco:A, 8xcp:A, 8xcq:A, 8xcr:A, 8xcs:A, 8xct:A, 8xcu:A, 8xcv:A, 8xcw:A, 8xcx:A, 8xcy:A, 8xcz:A, 8xd0:A, 8xd1:A, 8xd2:A, 8xd3:A, 8xd4:A, 8xd6:A, 8znb:A, 8znc:A, 8znd:A, 8zne:A, 8zng:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218