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BioLiP
>protein
KVKMSGLITVRTNEPLGVEKIKEVISKALENIEQDYESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGK
EENVDISVV

The query sequence (length=89) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5jb3:9 254 89 1.0000 0.3504 1.0000 1.91e-56 5jbh:9, 3qsy:B, 3v11:B
2 2pbf:A 218 32 0.1348 0.0550 0.3750 0.67 2pbf:B
3 5vp5:A 411 38 0.1685 0.0365 0.3947 2.9
4 6gnc:A 287 24 0.1011 0.0314 0.3750 4.0
5 6kc0:A 674 38 0.1236 0.0163 0.2895 4.8 6kbd:A
6 6muu:A 780 38 0.1236 0.0141 0.2895 5.2 6iqw:A, 6mur:A, 6mus:A, 6mut:A, 6o7e:A, 6o7h:A
7 6o7i:A 741 38 0.1236 0.0148 0.2895 5.3
8 2jgq:A 231 46 0.1685 0.0649 0.3261 5.7 2jgq:B
9 6n63:A 141 58 0.1685 0.1064 0.2586 5.8
10 6o75:A 710 38 0.1236 0.0155 0.2895 5.9 6o74:A, 6o78:A, 6o79:A, 6o7b:A, 6o7d:A
11 7r81:f1 104 46 0.1461 0.1250 0.2826 6.6
12 7aoe:A 1401 29 0.1236 0.0079 0.3793 6.8 7aoc:A, 7aod:A, 7aod:M
13 6khn:A 490 64 0.1573 0.0286 0.2188 6.9 6khn:B, 6kho:A, 6kho:B, 6khp:A, 6khp:B
14 2yye:B 343 55 0.1685 0.0437 0.2727 9.4 2yye:A, 2zau:A, 2zau:C
15 1i1n:A 224 30 0.1011 0.0402 0.3000 9.7 1kr5:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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