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BioLiP
>protein
KRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQK

The query sequence (length=79) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4a0c:F 80 79 0.9620 0.9500 0.9620 3.95e-50 8ij1:R, 7shk:R
2 2lgv:A 100 86 0.9494 0.7500 0.8721 1.44e-48 4a0c:D, 8b3g:R, 8b3i:R, 7b5l:R, 7b5m:R, 7b5n:R, 7b5s:R, 8cdk:R, 3dpl:R, 3dqv:R, 3dqv:Y, 4f52:B, 4f52:D, 8gq6:E, 8gq6:D, 8h33:D, 8h33:K, 8h33:L, 8h33:E, 8h34:R, 8h34:Q, 8h34:E, 8h34:D, 8h34:L, 8h34:K, 8h35:E, 8h35:D, 8h35:L, 8h35:K, 8h35:R, 8h35:Q, 8h35:W, 8h35:X, 8h36:E, 8h36:D, 8h37:E, 8h37:D, 8h37:R, 8h37:Q, 8h38:R, 8h3a:R, 8h3f:R, 8h3q:E, 8h3r:E, 8h3r:D, 2hye:D, 8jaq:R, 8jaq:V, 8jas:R, 8jas:V, 8jav:R, 8jav:V, 1ldj:B, 1ldk:C, 5n4w:R, 8or0:B, 8or2:B, 8or3:B, 4p5o:B, 4p5o:D, 7plo:T, 8pql:K, 8q7h:C, 8q7h:D, 8q7r:R, 8qu8:E, 8r5h:R, 6r7i:R, 6r7n:R, 8rhz:C, 8rhz:D, 3rtr:B, 3rtr:D, 3rtr:F, 3rtr:H, 8rwz:R, 8rx0:R, 6ttu:R, 1u6g:B, 8wqa:J, 8wqa:I, 8wqb:I, 8wqb:E, 8wqc:F, 8wqc:J, 8wqe:J, 8wqe:I, 8wqf:I, 8wqf:E, 8wqg:F, 8wqg:J, 8wqh:J, 8wqh:B, 7z8b:R, 7z8r:R, 7z8t:R, 7z8v:R, 7zbz:R
3 7oni:R 86 83 0.5316 0.4884 0.5060 2.55e-25 2ecl:A, 6v9i:R
4 5a31:B 84 83 0.4304 0.4048 0.4096 3.90e-18 5g04:B, 5g05:B, 9gaw:C, 5jg6:A, 5jg6:D, 2mt5:A, 7qe7:C, 4r2y:A, 4r2y:B, 4r2y:C, 4r2y:D, 8s4g:C, 6tm5:B, 6tnt:B, 4ui9:B
5 8a3t:U 114 85 0.3544 0.2456 0.3294 1.88e-11 8a5y:U
6 2ep4:A 74 24 0.1772 0.1892 0.5833 2.80e-04
7 6w7z:B 71 22 0.1392 0.1549 0.5000 0.001 6w9a:B, 6w9a:D, 6w9d:B, 6w9d:E, 6w9d:H
8 1x4j:A 75 22 0.1392 0.1467 0.5000 0.003
9 4v3k:C 75 22 0.1392 0.1467 0.5000 0.003 7ojx:A, 4v3k:F, 4v3l:C
10 6a3z:A 56 39 0.1899 0.2679 0.3846 0.007
11 1iym:A 55 22 0.1266 0.1818 0.4545 0.008
12 7t92:C 317 26 0.1392 0.0347 0.4231 0.034
13 1chc:A 68 22 0.1392 0.1618 0.5000 0.046
14 5zbu:A 74 23 0.1392 0.1486 0.4783 0.083 5zbu:D, 5zc4:A, 5zc4:D
15 5din:B 124 30 0.1266 0.0806 0.3333 0.087 5din:A
16 2ect:A 78 22 0.1392 0.1410 0.5000 0.11
17 6f98:A 78 22 0.1013 0.1026 0.3636 0.18
18 2kiz:A 69 30 0.1519 0.1739 0.4000 0.33 5lg0:A, 5lg7:A, 7p2k:A
19 2l0b:A 91 22 0.1266 0.1099 0.4545 0.35
20 8aaf:e 1527 56 0.1772 0.0092 0.2500 0.47 8agt:e, 8agu:e, 8agv:e, 8agw:e, 8agx:e, 8agz:e
21 6ryr:W 708 51 0.1646 0.0184 0.2549 0.58 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
22 7uhy:D 288 52 0.1899 0.0521 0.2885 0.69
23 5o6c:A 252 41 0.1646 0.0516 0.3171 0.94 6t7f:A
24 2lxh:C 58 21 0.1139 0.1552 0.4286 1.2 2lxp:C
25 2c53:A 228 28 0.1392 0.0482 0.3929 1.2 2c56:A, 1lau:E, 1udh:A
26 7uhy:C 578 47 0.1772 0.0242 0.2979 1.2
27 8adl:A 633 40 0.1646 0.0205 0.3250 1.2 8adl:I
28 4lad:B 69 21 0.1139 0.1304 0.4286 1.5
29 5d0m:C 60 22 0.1139 0.1500 0.4091 1.8 5ulh:C, 5ulk:C
30 7r70:A 150 22 0.1139 0.0600 0.4091 2.0 5d0i:A, 5d0i:B, 5d0k:C, 5d0k:F, 5d0k:I, 5d0k:L, 7r70:B, 7r71:A
31 4orh:H 142 22 0.1139 0.0634 0.4091 2.1 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
32 7bvw:A 79 14 0.1139 0.1139 0.6429 3.3 7bvw:B
33 2ke1:A 66 43 0.1646 0.1970 0.3023 3.4 2kft:A, 1xwh:A
34 3kic:A 520 29 0.1519 0.0231 0.4138 3.5 3kic:B, 3kic:C, 3kic:D, 3kic:E, 3kic:F, 3kic:G, 3kic:H, 3kic:I, 3kic:J, 3kic:K, 3kic:L, 3kic:M, 3kic:N, 3kic:O, 3kic:P, 3kic:Q, 3kic:R, 3kic:S, 3kic:T, 3kie:A, 3kie:B, 3kie:C, 3kie:D, 3kie:E, 3kie:F, 3kie:G, 3kie:H, 3kie:I, 3kie:J, 3kie:K, 3kie:L, 3kie:M, 3kie:N, 3kie:O, 3kie:P, 3kie:Q, 3kie:R, 3kie:S, 3kie:T
35 6wi7:A 206 22 0.1266 0.0485 0.4545 4.1 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
36 5mwl:A 421 27 0.1266 0.0238 0.3704 5.1 5mw8:A, 5mwl:B, 5mwm:A
37 5ait:A 129 69 0.2152 0.1318 0.2464 5.2 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
38 4rso:A 520 29 0.1519 0.0231 0.4138 7.2
39 8i3x:A 60 50 0.1772 0.2333 0.2800 7.6 8i3x:B
40 7l5u:A 520 29 0.1519 0.0231 0.4138 9.3 7l5u:B, 7l5u:C, 7l5u:D, 7l5u:E, 7l5u:F, 7l5u:G, 7l5u:H, 7l5u:I, 7l5u:J, 7l5u:K, 7l5u:L, 7l5u:M, 7l5u:N, 7l5u:O, 7l5u:P, 7l5u:Q, 7l5u:R, 7l5u:S, 7l5u:T, 7l5u:U, 7l5u:V, 7l5u:W, 7l5u:X, 7l5u:Y, 7l5u:Z, 7l5u:a, 7l5u:b, 7l5u:c, 7l5u:d, 7l5u:e, 7l5u:f, 7l5u:g, 7l5u:h, 7l5u:i, 7l5u:j, 7l5u:k, 7l5u:l, 7l5u:m, 7l5u:n, 7l5u:o, 7l5u:p, 7l5u:q, 7l5u:r, 7l5u:s, 7l5u:t, 7l5u:u, 7l5u:v, 7l5u:w, 7l5u:x, 7l5u:y, 7l5u:z, 7l5u:1, 7l5u:2, 7l5u:3, 7l5u:4, 7l5u:5, 7l5u:6, 7l5u:7, 7l5u:8
41 5egc:A 520 29 0.1519 0.0231 0.4138 9.3 3ng9:A, 3ng9:B, 3ng9:C, 3ng9:D, 3ng9:E, 3ng9:F, 3ng9:G, 3ng9:H, 3ng9:I, 3ng9:J, 3oah:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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