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BioLiP
>protein
KLPPGWEKRMFANGTVYYFNHITNASQFERPSG

The query sequence (length=33) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2nc3:A 33 33 1.0000 1.0000 1.0000 2.69e-20 2nc4:A, 2nc5:A, 2nc6:A
2 8sg2:A 163 34 0.8485 0.1718 0.8235 3.34e-14 6dun:A, 6dun:B, 7efj:A, 7efx:A, 7ekv:A, 7f0m:A, 7f0m:C, 7f0m:B, 7f0m:D, 1f8a:B, 4gwv:A, 3i6c:A, 3i6c:B, 1i8g:B, 1i8h:B, 3ikd:A, 3ikd:B, 3ikg:A, 3ikg:B, 9inr:A, 9inr:B, 2itk:A, 3jyj:A, 3jyj:B, 3kab:A, 3kac:A, 3kac:B, 3kad:A, 3kaf:A, 3kag:A, 3kah:A, 3kai:A, 3kce:A, 2lb3:A, 2n1o:A, 1nmw:A, 3ntp:A, 6o33:A, 6o34:A, 3odk:A, 3oob:A, 1pin:A, 2q5a:A, 3tc5:A, 3tcz:A, 3tdb:A, 4tns:A, 4tyo:A, 4tyo:B, 5uy9:A, 6vaj:A, 3wh0:A, 2xp3:A, 2xp4:A, 2xp5:A, 2xp6:A, 2xp7:A, 2xp8:A, 2xp9:A, 2xpa:A, 2xpb:A
3 5dws:C 40 30 0.5455 0.4500 0.6000 2.59e-08
4 5cq2:A 76 30 0.5455 0.2368 0.6000 5.46e-08 5dws:A, 5dws:E, 5dws:G, 5dzd:A, 5dzd:B, 2jo9:A, 4rof:A, 4rof:B
5 5cq2:A 76 30 0.3030 0.1316 0.3333 0.32 5dws:A, 5dws:E, 5dws:G, 5dzd:A, 5dzd:B, 2jo9:A, 4rof:A, 4rof:B
6 1i5h:W 50 30 0.4242 0.2800 0.4667 3.82e-06
7 7lp3:A 37 31 0.4545 0.4054 0.4839 1.06e-05 7lp3:C
8 2djy:A 42 30 0.4545 0.3571 0.5000 2.18e-05
9 2kxq:A 90 30 0.4545 0.1667 0.5000 5.09e-05 2laz:A, 2lb0:A, 2ltz:A
10 2kxq:A 90 31 0.3333 0.1222 0.3548 0.53 2laz:A, 2lb0:A, 2ltz:A
11 2lb1:A 35 30 0.3939 0.3714 0.4333 5.48e-05 2ltx:A
12 2laj:A 40 30 0.3939 0.3250 0.4333 7.94e-05
13 7lp2:E 37 30 0.4242 0.3784 0.4667 1.50e-04 2lb2:A, 7lp2:A, 7lp2:C, 2lty:A
14 2n8t:A 39 31 0.3333 0.2821 0.3548 2.61e-04
15 2jmf:A 43 30 0.4242 0.3256 0.4667 3.61e-04
16 2ltv:A 36 30 0.3636 0.3333 0.4000 4.02e-04 2law:A
17 2m3o:W 43 30 0.3636 0.2791 0.4000 0.008 2kpz:A, 2kq0:A, 2mpt:A, 4n7h:A
18 4lcd:A 419 30 0.3333 0.0263 0.3667 0.013 4lcd:B
19 1jmq:A 46 30 0.3333 0.2391 0.3667 0.018 1k5r:A, 1k9q:A, 1k9r:A, 2lax:A, 2lay:A, 2ltw:A
20 6jjz:B 96 31 0.4242 0.1458 0.4516 0.022 6jjz:A, 6kkg:A, 6kkg:B
21 6jjz:B 96 30 0.3030 0.1042 0.3333 1.4 6jjz:A, 6kkg:A, 6kkg:B
22 6jjy:A 128 30 0.3333 0.0859 0.3667 0.18 6j68:A, 6j68:B, 6j69:A, 6jjw:A, 6jjx:B, 6jjx:A
23 6jjy:A 128 31 0.3333 0.0859 0.3548 0.58 6j68:A, 6j68:B, 6j69:A, 6jjw:A, 6jjx:B, 6jjx:A
24 1eg4:A 260 26 0.2727 0.0346 0.3462 0.37
25 2jup:W 37 26 0.3030 0.2703 0.3846 0.43 2rly:W, 2rm0:W
26 2am1:A 454 21 0.3030 0.0220 0.4762 0.74 2am2:A, 3zm5:A, 3zm6:A
27 2oei:A 37 31 0.3636 0.3243 0.3871 0.96 2ho2:A
28 2ez5:W 46 30 0.2424 0.1739 0.2667 1.1
29 8pxx:A 99 27 0.2727 0.0909 0.3333 1.8 2dyf:A
30 2v57:C 172 9 0.1818 0.0349 0.6667 4.2 2v57:A
31 5nx7:A 308 29 0.3030 0.0325 0.3448 6.0 5nx6:A, 5nx6:B, 5nx7:B
32 1rqb:A 472 19 0.2727 0.0191 0.4737 9.3 1rqe:A, 1rqh:A, 1rr2:A, 1s3h:A, 1u5j:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417