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BioLiP
>protein
KEGYLMDHEGCKLSCFIRPSGYCGRECGIKKGSSGYCAWPACYCYGLPNWVKVWDRATNKC

The query sequence (length=61) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1npi:A 61 61 1.0000 1.0000 1.0000 6.66e-41
2 6q2o:E 572 36 0.1967 0.0210 0.3333 0.45 6q2j:E, 6q2j:F, 6q2o:F, 6q2r:E, 6q2r:F, 6q2r:Y, 6q2r:Z, 6q2s:E, 6q2s:F, 4ux8:A, 4ux8:B
3 6q2n:E 553 35 0.2131 0.0235 0.3714 0.81 6q2n:F
4 4rul:A 823 26 0.1803 0.0134 0.4231 2.5 1cy1:A, 1cy2:A, 1cy4:A, 1cy6:A, 1cy7:A, 1cy8:A, 1mw8:X, 3px7:A
5 5oxw:C 80 28 0.1639 0.1250 0.3571 4.5 5oxw:B, 5oxw:D, 5oxw:A, 5oxx:A
6 6nf6:A 411 23 0.1639 0.0243 0.4348 5.1 6nf6:B
7 5xd8:B 367 24 0.1639 0.0272 0.4167 6.1 5xd7:A, 5xd8:A, 5xd9:A
8 4ru4:B 590 37 0.1639 0.0169 0.2703 6.8 4ru4:A, 4ru4:C, 4ru4:D, 4ru4:E, 4ru4:F
9 5faw:B 806 23 0.1475 0.0112 0.3913 8.5 5fau:A, 5fau:B, 5fau:C, 5fau:D, 5faw:A, 5fay:A, 5fay:B, 6nd3:A, 6nd3:B, 6nd3:C, 6nd3:D, 6nd3:E, 6nd3:F, 6nd3:G, 6nd3:H, 6vue:A, 6vue:B
10 4r37:A 255 24 0.1803 0.0431 0.4583 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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