Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KDVYKCEICKMPFSVYSTLEKHMKKWHSDR

The query sequence (length=30) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8tho:A 100 30 1.0000 0.3000 1.0000 4.59e-17 8dtn:F, 6ki6:A, 6ki6:B, 8tlo:A, 6u9q:A
2 8fjl:D 1138 26 0.3333 0.0088 0.3846 0.036 8fjk:E, 8fjk:G, 8fjk:I, 8fjk:K, 8fjl:E, 8fjl:G, 8fjl:I, 8fjl:K, 6m99:C
3 1x5w:A 70 26 0.4000 0.1714 0.4615 0.038
4 7ysf:A 113 26 0.3333 0.0885 0.3846 0.29
5 2enh:A 46 21 0.2333 0.1522 0.3333 0.42
6 2em6:A 46 21 0.3000 0.1957 0.4286 1.0
7 8e3e:F 121 22 0.3333 0.0826 0.4545 1.0 8e3d:A, 8e3d:B, 8e3d:F, 8e3e:A, 8e3e:B, 7eyi:G, 7eyi:H, 8h9h:G, 7n5s:A, 7n5t:A, 7n5u:A, 7n5v:A, 7n5v:F, 7n5v:B, 7n5w:A
8 2emp:A 46 19 0.3333 0.2174 0.5263 1.0
9 2wbt:A 125 21 0.2667 0.0640 0.3810 1.2 2wbt:B
10 2eos:A 42 21 0.3000 0.2143 0.4286 1.3
11 1fv5:A 36 27 0.3667 0.3056 0.4074 1.5 2l6z:B, 1y0j:B
12 6ml4:A 143 21 0.2667 0.0559 0.3810 1.7 6ml2:A, 6ml3:A, 6ml5:A, 6ml6:A, 6ml7:A
13 2eon:A 46 27 0.3333 0.2174 0.3704 1.8
14 1mey:F 84 21 0.3333 0.1190 0.4762 1.9 1mey:C
15 1mey:F 84 21 0.3333 0.1190 0.4762 3.4 1mey:C
16 2adr:A 60 26 0.3000 0.1500 0.3462 2.3 1paa:A
17 2yrm:A 43 28 0.3000 0.2093 0.3214 2.6
18 7w1m:H 322 30 0.3000 0.0280 0.3000 3.1 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
19 6exn:N 242 12 0.2000 0.0248 0.5000 3.2 6bk8:F
20 7b9v:N 264 12 0.2000 0.0227 0.5000 3.3
21 2cot:A 77 21 0.3333 0.1299 0.4762 3.4
22 7dco:Q 292 12 0.2000 0.0205 0.5000 3.6 6j6g:Q, 6j6h:Q, 6j6n:Q, 6j6q:Q
23 2dlq:A 124 26 0.3667 0.0887 0.4231 3.6
24 2l1o:A 37 27 0.3333 0.2703 0.3704 3.7
25 1g2d:C 89 21 0.2333 0.0787 0.3333 3.7 1g2d:F, 1g2f:C, 1g2f:F
26 2eq3:A 46 20 0.3000 0.1957 0.4500 3.8
27 6wmi:A 146 24 0.2667 0.0548 0.3333 4.0 6wmi:D
28 1bbo:A 57 28 0.4000 0.2105 0.4286 4.2 3znf:A, 4znf:A
29 2ema:A 46 21 0.3333 0.2174 0.4762 4.7
30 1klr:A 30 26 0.3000 0.3000 0.3462 4.9 1kls:A, 1xrz:A, 5znf:A, 7znf:A
31 2dmd:A 96 26 0.3667 0.1146 0.4231 5.0
32 2dmd:A 96 21 0.3000 0.0938 0.4286 7.8
33 5mps:N 227 12 0.2000 0.0264 0.5000 5.0 5lj3:N, 5lj5:N, 5mq0:N
34 5y88:M 182 12 0.2000 0.0330 0.5000 5.4
35 4is1:D 54 24 0.2667 0.1481 0.3333 5.5 4f2j:C, 4is1:C, 3uk3:C, 3uk3:D
36 5gm6:Q 185 12 0.2000 0.0324 0.5000 5.7 5gmk:Q, 5wsg:Q, 5ylz:M
37 7nf9:A 67 26 0.3000 0.1343 0.3462 5.7
38 2en9:A 46 24 0.3000 0.1957 0.3750 6.0
39 2yt9:A 95 26 0.3333 0.1053 0.3846 6.0
40 6e93:A 112 21 0.3333 0.0893 0.4762 6.1 6e94:A
41 4eya:E 138 14 0.2667 0.0580 0.5714 6.6 4eya:G, 4eya:C, 3r2c:A, 3r2c:B, 3r2d:A, 3r2d:B
42 2kmk:A 82 22 0.3000 0.1098 0.4091 7.2
43 1dxg:A 36 14 0.2667 0.2222 0.5714 8.8 1dxg:B, 2lk5:A, 2lk5:B
44 2eoz:A 46 21 0.2000 0.1304 0.2857 9.3
45 2ct1:A 77 26 0.2667 0.1039 0.3077 9.8
46 2eoq:A 46 19 0.2667 0.1739 0.4211 9.9

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417