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BioLiP
>protein
IYIPRKCSATSRLIPAKEHGAVQINVGMVDANGVYNGKTETFAISGHVRQNGESDACLNRLMYEKKLLSFQN

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 3j7a:Z 72 72 1.0000 1.0000 1.0000 8.87e-51 3jbn:Z, 3jbp:Z, 6okk:Z, 8tpu:SZ
2 5xxu:V 80 70 0.7500 0.6750 0.7714 3.72e-35
3 8r6f:V 81 66 0.5417 0.4815 0.5909 8.43e-27 8ip8:cb, 8ip9:cb, 8ipa:cb
4 4v3p:ST 82 66 0.5000 0.4390 0.5455 1.01e-25
5 7qix:L 82 66 0.4722 0.4146 0.5152 4.63e-23 7qiz:BA
6 7ase:g 83 71 0.4861 0.4217 0.4930 1.28e-20
7 8auv:G 83 72 0.4861 0.4217 0.4861 1.54e-20 8b2l:G1
8 8c3a:X 87 69 0.4861 0.4023 0.5072 1.37e-19 8c3a:DI, 8cq7:X, 8cq7:DI, 8cqw:X, 8cqw:DI, 8cre:X, 8cre:DI, 8oeq:X, 8oeq:DI, 7pzy:W, 7q08:W, 7q0f:W, 7q0p:W, 7q0r:W, 8q5i:W
9 8bqd:a 87 69 0.5139 0.4253 0.5362 1.42e-19 8bn3:D1, 8bqx:a, 8c83:a, 8cah:a, 8ccs:x, 8cf5:x, 8cku:x, 8cmj:x, 5dat:d1, 5dge:d1, 5dgv:d1, 6eml:a, 8eub:BV, 8evp:BV, 8evq:BV, 8evr:BV, 8evs:BV, 8evt:BV, 8ewb:BV, 8ewc:BV, 6fai:V, 6fyy:V, 6gq1:AL, 6gqv:AL, 6gsm:V, 6gsn:V, 8i7j:V, 5it7:V, 5it9:V, 3j77:21, 3j78:21, 3j80:V, 5juu:SB, 8k2d:SV, 8k82:SV, 5m1j:V2, 7mpi:BV, 7mpj:BV, 7n8b:BV, 5ndv:d1, 7nrd:Sa, 5obm:d1, 7osa:eS21, 7osm:eS21, 6q8y:a, 6rbd:V, 6rbe:V, 8rw1:V, 6s47:BW, 8s8d:V, 8s8e:V, 8s8f:V, 8s8i:V, 6snt:V, 6sv4:a, 6t4q:SV, 6t7t:SV, 6tnu:a, 4u3n:D1, 4u4n:D1, 4u4o:D1, 4u4y:D1, 4u50:d1, 4u53:D1, 4v6i:AT, 4v8y:AV, 4v8z:AV, 4v92:BV, 6xiq:AL, 6xir:AL, 6z6j:SV, 6z6k:SV, 7zrs:AV, 7zux:DV
10 6az1:Y 88 71 0.4444 0.3636 0.4507 7.36e-19 8rxh:SY, 8rxx:SY
11 8ova:AR 89 71 0.4583 0.3708 0.4648 5.71e-18
12 7syl:W 83 70 0.4444 0.3855 0.4571 1.38e-17 6gz3:BV, 6olz:BV, 6om0:SV, 6om7:SV, 7oyb:V2, 7tor:AS21, 7wtw:V, 7wtz:V
13 6xu8:AV 82 70 0.4167 0.3659 0.4286 2.81e-14
14 4bts:AZ 97 70 0.3194 0.2371 0.3286 2.67e-09 4bts:BZ, 4bts:CZ, 4bts:DZ, 4v5o:AZ, 4v5o:BZ
15 7v4r:A 437 42 0.2083 0.0343 0.3571 1.1
16 7bm0:A 427 39 0.2083 0.0351 0.3846 1.2 7blv:A, 7nxu:A
17 4wa2:A 491 59 0.2778 0.0407 0.3390 3.1 6bkq:A, 6bkq:C, 6bkq:E, 6cex:A, 6cex:C, 6cex:E, 1mqm:A, 1mqm:D, 1mqm:G, 1mqn:A, 1mqn:D, 5t6n:A, 5t6n:E, 5t6n:C, 6tzb:A, 6tzb:C, 6tzb:E, 2vir:C, 2vis:C, 2vit:C, 5vtq:A, 5vtq:C, 5vtq:E, 5vtr:A, 5vtr:C, 5vtr:E, 5vtv:A, 5vtv:C, 5vtv:E, 5vtw:C, 5vtw:E, 5vtw:A, 5vty:A, 5vty:C, 5vty:E, 5vu4:A, 5vu4:C, 5vu4:E, 4wa2:B, 4wa2:C, 4wa2:E, 6y5j:E, 2ypg:A, 2ypg:C, 2ypg:E
18 6wzt:A 494 33 0.1806 0.0263 0.3939 3.9 6aos:A, 6aot:A, 6aou:A, 6aov:A, 6bkr:A, 6bks:A, 6bkt:A, 6cex:D, 6cex:B, 3eym:B, 3eym:D, 3eym:F, 8faw:A, 1hgg:B, 1hgg:D, 1hgg:F, 1hgh:B, 1hgh:D, 1hgh:F, 1htm:B, 1htm:D, 1htm:F, 6nsa:A, 6nsb:A, 6nsf:A, 6nsg:A, 5t6n:B, 5t6n:D, 5t6n:F, 8tj6:B, 8tj9:A, 8tja:A, 8tjb:A, 4uny:D, 4uo0:D, 8uwa:B, 4wea:A, 2yp3:A, 2yp4:A, 2yp5:A, 2yp8:A, 2yp9:A
19 5e6y:C 584 53 0.2083 0.0257 0.2830 9.4 5e6z:C, 5e70:C, 4lpc:C
20 8sdb:C 604 53 0.2083 0.0248 0.2830 9.4 5e6y:A, 5e6y:B, 5e6y:D, 5e6z:A, 5e6z:B, 5e6z:D, 5e70:A, 5e70:B, 5e70:D, 4lpc:A, 4lpc:B, 4lpc:D, 4lq1:B, 4lq1:C, 4lq1:D, 4lq1:A, 8sdb:A, 8sdb:B
21 5n1t:A 393 30 0.1528 0.0280 0.3667 9.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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