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BioLiP
>protein
ITGTLTVLTGLQIGAKPVVPMIPGTSLKGKVLTEVKFENAINRVTAKANLRQMERVIPGSEDYLGGSGTRGYGQVKF

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8x5d:G 77 77 1.0000 1.0000 1.0000 5.49e-51
2 8x5d:K 235 93 0.6104 0.2000 0.5054 1.16e-19 8wfx:I, 8wfx:J, 8wfx:K, 8wfx:L, 8wfx:G, 8wfx:H, 8x5d:L, 8x5d:J, 8x5d:I, 8x5d:H
3 8x5d:K 235 88 0.4805 0.1574 0.4205 8.80e-09 8wfx:I, 8wfx:J, 8wfx:K, 8wfx:L, 8wfx:G, 8wfx:H, 8x5d:L, 8x5d:J, 8x5d:I, 8x5d:H
4 6ifn:F 220 85 0.4416 0.1545 0.4000 1.06e-10 6ifk:G, 6ifk:F, 6ifk:E, 6ifl:D, 6ifl:E, 6ifl:F, 6ifn:E, 6ifn:G, 6ifr:G, 6ifr:F, 6ifr:E, 6ifu:D, 6ifu:E, 6ifu:F, 6ify:G, 6ify:F, 6ify:E, 6ifz:G, 6ifz:F, 6ifz:E, 6ig0:G, 6ig0:F, 6ig0:E, 6nud:C, 6nud:E, 6nud:N, 6nud:O, 6nud:P, 6nue:C, 6nue:E, 6nue:N, 6nue:O, 6nue:P
5 6ifn:F 220 79 0.2987 0.1045 0.2911 0.83 6ifk:G, 6ifk:F, 6ifk:E, 6ifl:D, 6ifl:E, 6ifl:F, 6ifn:E, 6ifn:G, 6ifr:G, 6ifr:F, 6ifr:E, 6ifu:D, 6ifu:E, 6ifu:F, 6ify:G, 6ify:F, 6ify:E, 6ifz:G, 6ifz:F, 6ifz:E, 6ig0:G, 6ig0:F, 6ig0:E, 6nud:C, 6nud:E, 6nud:N, 6nud:O, 6nud:P, 6nue:C, 6nue:E, 6nue:N, 6nue:O, 6nue:P
6 9ash:H 214 76 0.4286 0.1542 0.4342 4.28e-10 9ash:F, 9ash:G, 9ash:I, 9asi:F, 9asi:H, 9asi:G, 9asi:I, 6xn3:F, 6xn3:H, 6xn3:G, 6xn3:I, 6xn4:F, 6xn4:H, 6xn4:G, 6xn5:I, 6xn5:F, 6xn5:H, 6xn5:G, 6xn7:F, 6xn7:H, 6xn7:G, 6xn7:I
7 9ash:H 214 49 0.2468 0.0888 0.3878 0.14 9ash:F, 9ash:G, 9ash:I, 9asi:F, 9asi:H, 9asi:G, 9asi:I, 6xn3:F, 6xn3:H, 6xn3:G, 6xn3:I, 6xn4:F, 6xn4:H, 6xn4:G, 6xn5:I, 6xn5:F, 6xn5:H, 6xn5:G, 6xn7:F, 6xn7:H, 6xn7:G, 6xn7:I
8 6mur:D 287 80 0.3896 0.1045 0.3750 1.74e-09 6iqw:C, 6iqw:D, 6mur:C, 6mus:C, 6mus:D, 6mus:K, 6mut:C, 6mut:D, 6muu:C, 6muu:D, 6o7e:C, 6o7e:D, 6o7h:C, 6o7h:D, 6o7i:C, 6o7i:D, 6o7i:K
9 6mur:D 287 49 0.2338 0.0627 0.3673 0.18 6iqw:C, 6iqw:D, 6mur:C, 6mus:C, 6mus:D, 6mus:K, 6mut:C, 6mut:D, 6muu:C, 6muu:D, 6o7e:C, 6o7e:D, 6o7h:C, 6o7h:D, 6o7i:C, 6o7i:D, 6o7i:K
10 8do6:E 205 29 0.2727 0.1024 0.7241 1.22e-06 8do6:G, 8do6:F, 7uzw:A, 7uzw:B, 7uzw:C, 7uzw:D, 7uzx:A, 7uzx:B, 7uzx:C, 7uzx:D, 7uzy:D, 7uzy:C, 7uzy:A, 7uzy:B, 7uzz:D, 7uzz:C, 7uzz:A, 7uzz:B, 7v00:A, 7v00:B, 7v00:C, 7v00:D, 7v01:A, 7v01:B, 7v01:C, 7v02:A, 7v02:B, 7v02:C
11 8do6:E 205 49 0.2597 0.0976 0.4082 0.011 8do6:G, 8do6:F, 7uzw:A, 7uzw:B, 7uzw:C, 7uzw:D, 7uzx:A, 7uzx:B, 7uzx:C, 7uzx:D, 7uzy:D, 7uzy:C, 7uzy:A, 7uzy:B, 7uzz:D, 7uzz:C, 7uzz:A, 7uzz:B, 7v00:A, 7v00:B, 7v00:C, 7v00:D, 7v01:A, 7v01:B, 7v01:C, 7v02:A, 7v02:B, 7v02:C
12 4qts:C 186 49 0.2468 0.1022 0.3878 7.24e-05 4qts:D
13 7uzw:E 184 40 0.2597 0.1087 0.5000 5.26e-04 7uzx:E
14 6mur:F 377 37 0.1948 0.0398 0.4054 0.078 6iqw:F, 6mus:F, 6mut:F
15 6muu:F 323 35 0.1948 0.0464 0.4286 0.11
16 8hib:V 216 41 0.1429 0.0509 0.2683 0.58
17 6o7e:Y 361 19 0.1299 0.0277 0.5263 4.2 6o7h:F, 6o7i:F
18 1bf2:A 750 19 0.1558 0.0160 0.6316 4.3
19 5irp:A 386 45 0.1948 0.0389 0.3333 4.5 5irp:B, 6q70:A, 6q70:B, 6q71:A, 6q71:B, 6q72:A, 6q72:B, 6q72:D, 6q72:E
20 5nal:B 150 25 0.1429 0.0733 0.4400 4.6 5e80:B, 5e80:A, 5e8f:A, 5e8f:C, 5f2u:A, 5f2u:B, 4jv6:B, 4jv8:B, 4jvb:B, 4jvf:B, 5ml2:B, 5ml3:B, 5ml4:B, 5ml6:B, 5ml8:B, 7pad:B, 7pae:B, 7q9q:BBB, 7q9r:BBB, 7q9s:AAA, 7q9s:BBB, 7q9u:DDD, 7q9u:CCC, 7qf9:AAA, 7qf9:BBB, 7qjk:BBB, 7qjk:AAA, 7qjk:CCC, 7qjk:DDD, 3t5g:B, 3t5i:D, 3t5i:A, 3t5i:B, 3t5i:C, 5tar:B, 5tb5:B, 5tb5:D, 5x72:A, 5x73:A, 5x74:A, 5yav:B, 5yaw:B
21 6tzk:A 451 26 0.1429 0.0244 0.4231 5.2
22 5wze:B 449 57 0.2208 0.0379 0.2982 7.3 5wze:A, 5wze:C, 5wze:D
23 9ash:J 311 41 0.1818 0.0450 0.3415 7.5 9asi:J, 6xn3:J, 6xn4:J, 6xn5:J, 6xn7:J
24 3ict:A 557 14 0.1299 0.0180 0.7143 7.8 3icr:A, 3icr:B, 3ics:A, 3ics:B, 3ict:B
25 6ruz:A 443 19 0.1299 0.0226 0.5263 7.9 6ruz:B, 6ruz:C, 6ruz:D, 6rvb:A, 6rvb:B, 6rvb:C, 6rvb:D, 6rvh:A, 6rvh:B, 6rvh:C, 6rvh:D
26 3ues:B 458 61 0.2208 0.0371 0.2787 8.4 3mo4:A, 3ues:A, 3uet:A, 3uet:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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