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BioLiP
>protein
IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK

The query sequence (length=52) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7a01:E2 52 52 1.0000 1.0000 1.0000 1.16e-32 8a3d:g, 5aj0:Am, 8b5l:m, 8b6c:m, 9bdl:AL40, 9bdn:AL40, 9bdp:AL40, 7bhp:Lm, 8bhf:Z1, 8bpo:l2, 8btk:Bm, 7cpu:Lm, 7cpv:Lm, 4d5y:m, 4d67:m, 6d90:m, 6d9j:m, 9f1b:Bm, 9f1c:Bm, 9f1d:Bm, 7f5s:Lm, 6frk:m, 6ftg:m, 6fti:m, 6ftj:m, 8g5y:Lm, 8g5z:Lm, 8g60:Lm, 8g61:Lm, 8g6j:Lm, 8glp:Lm, 6gz3:Am, 6gz4:Am, 6gz5:Am, 6hcf:m3, 6hcj:m3, 6hcm:m3, 6hcq:m3, 8ifd:2g, 8ife:2g, 6ip5:2g, 6ip6:2g, 6ip8:2g, 3j7o:m, 3j7p:m, 3j7q:m, 3j7r:m, 3j92:m, 3jag:m, 3jah:m, 3jai:m, 3jaj:m, 3jan:m, 8jdj:r, 8jdk:r, 8jdl:r, 8jdm:r, 8k2c:Lm, 5lks:Lm, 6lqm:R, 7ls1:g2, 7ls2:g2, 5lzs:m, 5lzt:m, 5lzu:m, 5lzv:m, 5lzw:m, 5lzx:m, 5lzy:m, 5lzz:m, 7mdz:m, 6mtb:m, 6mtc:m, 6mtd:m, 6mte:m, 7nfx:m, 7nwg:m3, 7nwh:m, 7nwi:m, 7o7y:Bm, 7o7z:Bm, 7o80:Bm, 7o81:Bm, 7obr:m, 8ohd:Lm, 8oj0:Lm, 8oj5:Lm, 8oj8:Lm, 6ole:n, 6olf:n, 6olg:Am, 6oli:n, 6olz:Am, 6om0:n, 6om7:n, 7oya:m1, 7oyb:m1, 7oyc:m1, 7oyd:m, 8p2k:Bm, 6p5i:Am, 6p5j:Am, 6p5k:Am, 6p5n:Am, 8q7z:Bm, 8q87:Bm, 8qfd:m, 7qgg:n, 8qoi:Lm, 7qvp:Lm, 7qvp:Mm, 7qwq:m, 7qwr:m, 7qws:m, 6qzp:Lm, 6r5q:m, 6r6g:m, 6r6p:m, 6r7q:m, 8rjb:m, 8rjc:m, 8rjd:m, 8scb:m, 6sgc:m2, 6swa:k, 5t2c:g, 6t59:m3, 7tm3:m, 7toq:AL40, 7tor:AL40, 7tut:m, 7ucj:m, 7uck:m, 4ug0:Lm, 4ujc:Bm, 4ujd:Am, 4uje:Cm, 4v6w:Cm, 4v6x:Cm, 6xa1:Lm, 7xnx:Lm, 7xny:Lm, 8xsx:Lm, 8xsy:Lm, 8xsz:Lm, 6xu6:Cm, 6xu7:Cm, 6xu8:Cm, 6y0g:Lm, 8y0w:Lm, 8y0x:Lm, 6y2l:Lm, 6y57:Lm, 6y6x:Lm, 8yoo:Lm, 8yop:Lm, 6z6l:Lm, 6z6m:Lm, 6z6n:Lm, 7zjw:Lp, 7zjx:Lp, 6zm7:Lm, 6zme:Lm, 6zmi:Lm, 6zmo:Lm, 6zvk:E2
2 5an9:H 52 50 0.8462 0.8462 0.8800 1.09e-26 5anb:H, 5anc:H, 6qkl:H
3 7qiw:o 52 52 0.8269 0.8269 0.8269 2.56e-26 8azw:Y, 8b2l:Y3, 8ip8:JB, 8ipa:JB, 8ipb:JB, 8jiv:Cm, 7qiz:o, 4v3p:Lp, 4v7e:Cm
4 8aaf:Z 52 52 0.8077 0.8077 0.8077 7.42e-26 8agt:Z, 8agu:Z, 8agv:Z, 8agw:Z, 8agx:Z, 8agz:Z, 5apn:m, 5apo:m, 7azy:P, 7b7d:Li, 8bip:Lm, 8bjq:Lm, 8bn3:Q0, 8bqd:AO, 8bqx:AO, 8c3a:AN, 8c3a:CH, 8ccs:Y, 8cdl:Y, 8cdr:Y, 8ceh:Y, 8cf5:Y, 8cg8:Y, 8cgn:Y, 8civ:Y, 8cku:Y, 8cmj:Y, 8cq7:AN, 8cq7:CH, 8cqw:AN, 8cqw:CH, 8cre:AN, 8cre:CH, 5dat:Q0, 5dat:q0, 5dc3:Q0, 5dc3:q0, 5dge:Q0, 5dge:q0, 5dgf:Q0, 5dgf:q0, 5dgv:Q0, 5dgv:q0, 8eub:Am, 8evp:Am, 8evq:Am, 8evr:Am, 8evs:Am, 8evt:Am, 8ewb:Am, 8ewc:Am, 5fci:Q0, 5fci:q0, 5fcj:Q0, 5fcj:q0, 5gak:o, 6gq1:m, 6gqb:m, 6gqv:m, 6hd7:o, 6hhq:AN, 6hhq:DO, 5i4l:Q0, 5i4l:q0, 6i7o:AO, 6i7o:XO, 5it7:mm, 3j6x:80, 3j6y:80, 3j77:90, 3j78:90, 5juo:RA, 5jup:RA, 5jus:RA, 5jut:RA, 5juu:RA, 8k2d:Lm, 8k82:Lm, 5lyb:Q0, 5lyb:q0, 5m1j:m5, 5mc6:AO, 5mei:AN, 5mei:DO, 7mpi:Am, 7mpj:Am, 6n8m:z, 6n8n:z, 6n8o:z, 7n8b:Am, 5ndg:Q0, 5ndg:q0, 5ndv:Q0, 5ndv:q0, 5ndw:Q0, 5ndw:q0, 7nrc:Lo, 7nrd:Lo, 5obm:Q0, 5obm:q0, 8oeq:AN, 8oeq:CH, 6oig:m, 7olc:Lm, 7old:Lm, 5on6:AN, 5on6:DO, 8oo0:Lm, 7osa:eL40, 7osm:eL40, 8p8m:RO, 8p8n:RO, 8p8u:RO, 8pfr:RO, 7pzy:AN, 7q08:AN, 7q0f:AN, 7q0p:AN, 7q0r:AN, 8q5i:AN, 6q8y:AO, 6qik:t, 6qt0:t, 6qtz:t, 6r84:o, 6r86:o, 6r87:o, 7r81:o1, 6ri5:t, 7rr5:Lm, 6s47:Ao, 6snt:ad, 6sv4:AO, 6sv4:XO, 6sv4:zO, 6t4q:Lm, 5t62:z, 5t6r:z, 6t7i:Lm, 6t7t:Lm, 6t83:mb, 6t83:X, 5tbw:AN, 5tbw:DO, 6tb3:AO, 5tga:Q0, 5tga:q0, 5tgm:Q0, 5tgm:q0, 6tnu:AO, 7too:AL40, 7top:AL40, 4u3m:Q0, 4u3m:q0, 4u3n:Q0, 4u3n:q0, 4u3u:Q0, 4u3u:q0, 4u4n:Q0, 4u4n:q0, 4u4o:Q0, 4u4o:q0, 4u4q:Q0, 4u4q:q0, 4u4r:Q0, 4u4r:q0, 4u4u:Q0, 4u4u:q0, 4u4y:Q0, 4u4y:q0, 4u4z:Q0, 4u4z:q0, 4u50:Q0, 4u50:q0, 4u51:Q0, 4u51:q0, 4u52:Q0, 4u52:q0, 4u53:Q0, 4u53:q0, 4u55:Q0, 4u55:q0, 4u56:Q0, 4u56:q0, 4u6f:Q0, 4u6f:q0, 6uz7:Bm, 4v6i:Bp, 4v88:Bm, 4v88:Dm, 4v8t:m, 4v8y:Bm, 4v8z:Bm, 4v91:m, 6woo:m, 6xiq:m, 8y0u:Lm, 7z3n:Lm, 7z3o:Lm, 6z6j:Lm, 6z6k:Lm, 7zpq:Bl, 7zrs:Bl, 7zs5:Bn, 7zuw:Bl, 7zux:El, 7zw0:Lp
5 3j79:f 51 50 0.8077 0.8235 0.8400 1.71e-25 3jbn:Af, 3jbo:Af, 3jbp:Af, 8tpu:Af, 5umd:f
6 9bh5:Cm 51 51 0.8269 0.8431 0.8431 3.90e-25 9cai:Cm
7 5xxb:l 52 52 0.8077 0.8077 0.8077 1.68e-24
8 4v8p:AK 52 51 0.6346 0.6346 0.6471 2.98e-19 4v8p:DK, 4v8p:FK, 4v8p:HK
9 6zj3:L2 51 51 0.6346 0.6471 0.6471 3.21e-19
10 8rxh:Lm 52 52 0.6154 0.6154 0.6154 1.12e-17 6az3:m, 8ova:Bs, 8ove:Bs, 8ovj:m, 8rxx:Lm, 5t2a:q, 4v8m:Bs
11 5xy3:m 52 50 0.5769 0.5769 0.6000 8.96e-15
12 6zu5:LMM 54 38 0.5577 0.5370 0.7632 4.71e-14
13 8p5d:LMM 52 35 0.4038 0.4038 0.6000 7.28e-09 8p60:LMM, 8p60:KMM, 7qca:LMM
14 6rm3:LMM 50 51 0.5000 0.5200 0.5098 1.25e-08
15 7pwg:m 51 52 0.5385 0.5490 0.5385 1.54e-08 8br8:Ls, 8brm:Ls, 8bsi:Ls, 8bsj:Ls, 8btd:Ls, 8btr:Ls, 8fru:m, 7pwo:m2
16 2ayj:A 56 50 0.3846 0.3571 0.4000 0.018
17 8hku:L40E 55 50 0.3846 0.3636 0.4000 0.022 8hkv:L40E, 8hky:L40E, 8hkz:L40E, 8hl1:L40E, 8hl2:L40E, 8hl3:L40E, 8hl4:L40E, 8hl5:L40E
18 7zok:A 51 45 0.3077 0.3137 0.3556 0.036
19 7qep:P0 49 28 0.2692 0.2857 0.5000 0.18
20 3cu0:A 250 24 0.2115 0.0440 0.4583 0.42 3cu0:B, 1fgg:A, 1fgg:B, 1kws:A, 1kws:B
21 7kc0:A 1004 34 0.2115 0.0110 0.3235 5.8 3iay:A, 6p1h:A
22 2m48:A 141 28 0.1538 0.0567 0.2857 7.1 9c5e:A, 2lwr:A
23 1iyn:A 275 35 0.2308 0.0436 0.3429 8.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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