BioLiP

>protein
HMGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEKEERDRA

The query sequence (length=62) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5ejw:A	80	61	0.9677	0.7500	0.9836	6.55e-39	5epj:A, 2kvm:A, 2l12:A, 2l1b:A, 4mn3:A, 8sii:A, 8sii:B, 6v2r:A, 4x3k:A, 4x3k:B, 4x3s:B, 4x3s:A, 4x3t:A, 4x3t:B, 4x3t:C, 4x3t:D, 4x3t:E, 4x3t:F, 4x3u:A, 4x3u:B
2	5epl:B	58	55	0.6452	0.6897	0.7273	1.82e-26	5epl:A
3	5eq0:A	55	55	0.6129	0.6909	0.6909	7.37e-25	3i91:A
4	3gv6:A	56	54	0.6290	0.6964	0.7222	8.16e-25	3i90:A, 3i90:B
5	5epk:A	54	54	0.5806	0.6667	0.6667	1.46e-23	3h91:A, 3h91:B
6	1pfb:A	55	50	0.5000	0.5636	0.6200	7.97e-17	1pdq:A
7	7vyw:A	47	38	0.3710	0.4894	0.6053	2.79e-13
8	6asz:A	53	48	0.4194	0.4906	0.5417	1.38e-12	6at0:A, 1kna:A, 1kne:A, 6mha:A, 1q3l:A
9	3tzd:A	58	47	0.3710	0.3966	0.4894	1.37e-11	3dm1:A, 3dm1:C, 3dm1:G, 3dm1:E, 2l11:A
10	7n27:A	57	45	0.3710	0.4035	0.5111	2.70e-10	7n27:D, 7n27:B, 7n27:C, 7n27:E, 7n27:F
11	3qo2:A	61	50	0.3871	0.3934	0.4800	3.37e-10	7m5u:A, 3qo2:D, 3qo2:B, 3qo2:C, 3r93:A, 3r93:D, 3r93:B, 3r93:C, 3svm:A, 6v2s:A, 6v2s:B
12	2rvn:A	83	50	0.3387	0.2530	0.4200	4.20e-10
13	1guw:A	73	39	0.3387	0.2877	0.5385	1.08e-09	6d07:A, 6d07:B, 6d08:A, 6d08:B
14	8uxq:A	170	45	0.3387	0.1235	0.4667	1.23e-09	3fdt:A
15	6v41:AAA	61	45	0.3387	0.3443	0.4667	5.61e-09
16	6v2d:G	64	42	0.3387	0.3281	0.5000	2.26e-07	5jjz:A, 7slw:A, 7slw:B, 7slw:C, 7slw:D, 7slw:E, 7slw:F, 8sp6:A, 8sp6:B, 8sp6:C, 8sp6:D, 8sp6:E, 8sp6:F, 6v2d:I, 6v2d:K, 6v2d:A, 6v2d:C, 6v2d:E, 6v2h:A, 6v2h:C, 6v2h:E, 6v2h:G, 6v2h:I, 6v2h:K, 6v3n:A, 6v3n:B, 6v8w:A, 6v8w:B, 6v8w:C, 6v8w:D, 6v8w:E, 6v8w:F, 6v8w:G, 6v8w:H, 6v8w:I, 6v8w:J, 6v8w:K, 6v8w:L, 6v8w:M, 6v8w:N, 6v8w:O, 6v8w:P, 6v8w:Q, 6v8w:R, 6v8w:S, 6v8w:T, 6v8w:U, 6v8w:V, 6v8w:W, 6v8w:X, 6v8w:Y, 6v8w:Z
17	4u68:A	64	49	0.3226	0.3125	0.4082	1.70e-06	4quf:A, 4quf:B, 4quf:C, 4quf:D, 4quf:E, 4quf:F, 4u68:B, 4u68:C
18	7vrf:A	61	51	0.3065	0.3115	0.3725	4.27e-06	7vrf:B
19	6s47:Bi	952	53	0.2903	0.0189	0.3396	6.51e-06
20	2rsn:A	75	42	0.2742	0.2267	0.4048	7.63e-05	3g7l:A
21	2b2w:A	177	25	0.2097	0.0734	0.5200	2.51e-04	5afw:A, 2b2t:A, 2b2u:A, 2b2v:A, 4nw2:A, 4nw2:C, 4o42:A
22	6ryr:W	708	25	0.1774	0.0155	0.4400	0.052	2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
23	7ubu:A	708	29	0.1613	0.0141	0.3448	0.16	4ft4:A, 4ft4:B
24	4fsx:A	680	29	0.1613	0.0147	0.3448	0.17	4fsx:B, 4ft2:B, 4ft2:A
25	3oa6:A	84	23	0.1452	0.1071	0.3913	0.18	3oa6:B
26	6guu:B	204	25	0.1935	0.0588	0.4800	0.19	6guu:A
27	6q3m:C	219	25	0.1774	0.0502	0.4400	0.23	6q3m:A, 6q3m:B
28	7uci:A	686	37	0.2097	0.0190	0.3514	1.4	7uci:B
29	7ucl:A	616	37	0.2097	0.0211	0.3514	1.5	7ucl:B
30	3jtx:B	393	24	0.1613	0.0254	0.4167	4.3
31	5fm6:A	426	42	0.2419	0.0352	0.3571	5.1	5fm7:A, 4ww4:A
32	3ui2:A	234	28	0.2258	0.0598	0.5000	5.5	3dep:A, 2hug:A
33	5e4w:C	105	28	0.2258	0.1333	0.5000	6.1	5e4w:D, 5e4x:A
34	9gd1:W	849	39	0.2097	0.0153	0.3333	6.3
35	7tn2:W	895	41	0.2097	0.0145	0.3171	7.7	9gd2:W, 9gd3:W
36	6jt5:A	409	19	0.1129	0.0171	0.3684	7.7	6jwf:A, 6jwf:B
37	6ftx:W	878	41	0.2097	0.0148	0.3171	7.9	6g0l:W, 5j70:A, 5j70:B, 3mwy:W, 3ted:A
38	6g0l:M	855	41	0.2097	0.0152	0.3171	8.4	7nkx:W, 5o9g:W

[Back]