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BioLiP
>protein
GSSGSSGQHQEAGAGDLCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDSGPS
SG

The query sequence (length=82) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2co8:A 82 82 1.0000 1.0000 1.0000 2.77e-56
2 8y6k:A 741 59 0.7195 0.0796 1.0000 2.93e-39 2bra:A, 2bra:B, 2bry:A, 2bry:B, 2c4c:A, 2c4c:B, 4txi:A, 4txk:A
3 2d8y:A 91 93 0.4634 0.4176 0.4086 2.74e-12
4 2lzu:A 72 64 0.2927 0.3333 0.3750 6.07e-07
5 2cu8:A 76 67 0.3049 0.3289 0.3731 1.03e-06
6 1b8t:A 192 64 0.2683 0.1146 0.3438 3.31e-06 1ctl:A
7 1b8t:A 192 40 0.1829 0.0781 0.3750 8.48e-04 1ctl:A
8 2dj7:A 80 83 0.4024 0.4125 0.3976 3.17e-05
9 1iml:A 76 51 0.2317 0.2500 0.3725 3.19e-05
10 1x63:A 82 84 0.3293 0.3293 0.3214 1.01e-04
11 1cxx:A 59 54 0.1951 0.2712 0.2963 2.33e-04 1ibi:A, 1qli:A
12 2o13:A 58 51 0.2073 0.2931 0.3333 3.71e-04
13 2d8x:A 70 83 0.3659 0.4286 0.3614 6.03e-04
14 1v6g:A 81 82 0.3415 0.3457 0.3415 6.86e-04
15 2ep4:A 74 45 0.2439 0.2703 0.4444 7.17e-04
16 1x64:A 89 92 0.4024 0.3708 0.3587 7.47e-04
17 1a7i:A 60 53 0.2195 0.3000 0.3396 0.009
18 2egp:A 79 73 0.3415 0.3544 0.3836 0.012
19 1x4k:A 72 84 0.3293 0.3750 0.3214 0.012
20 2o10:A 60 54 0.2073 0.2833 0.3148 0.016
21 2ect:A 78 45 0.2317 0.2436 0.4222 0.031
22 2mbv:A 96 62 0.2317 0.1979 0.3065 0.034
23 2dfy:X 158 57 0.2195 0.1139 0.3158 0.046 2dfy:C, 1rut:X
24 2dfy:X 158 51 0.1707 0.0886 0.2745 2.0 2dfy:C, 1rut:X
25 2cor:A 79 84 0.3537 0.3671 0.3452 0.050
26 2ehe:A 82 84 0.3293 0.3293 0.3214 0.11
27 2cur:A 69 45 0.1951 0.2319 0.3556 0.21
28 2cuq:A 80 83 0.3415 0.3500 0.3373 0.21
29 2lxh:C 58 49 0.2073 0.2931 0.3469 0.32 2lxp:C
30 3llx:A 373 32 0.1707 0.0375 0.4375 0.35
31 1x61:A 72 48 0.2195 0.2500 0.3750 0.51
32 1zfo:A 30 26 0.1220 0.3333 0.3846 0.75
33 6yxy:BX 133 35 0.1585 0.0977 0.3714 1.0 7aoi:BX, 6hiv:BX, 6hix:BX
34 1m3v:A 122 51 0.1707 0.1148 0.2745 1.2
35 8cli:B 689 39 0.1463 0.0174 0.3077 1.2 8clj:B, 8clj:G, 8cll:B, 8cll:G
36 2l4z:A 121 51 0.1707 0.1157 0.2745 1.3
37 1wyh:A 72 55 0.2439 0.2778 0.3636 1.4
38 4jcj:C 150 33 0.1463 0.0800 0.3636 1.8 4jcj:A, 4jcj:B
39 4lad:B 69 29 0.1463 0.1739 0.4138 3.0
40 1x62:A 79 44 0.1829 0.1899 0.3409 3.8
41 2lxd:A 123 35 0.1341 0.0894 0.3143 4.1 2l6y:B, 2l6z:C
42 1wil:A 89 48 0.2073 0.1910 0.3542 5.8 5xht:A
43 2h0v:A 335 37 0.1463 0.0358 0.3243 6.3 2h0v:B, 8hfb:A, 8hfb:B, 1y3t:A, 1y3t:B
44 6a3z:A 56 32 0.1098 0.1607 0.2812 7.5
45 7aih:Ax 167 20 0.0976 0.0479 0.4000 7.5 7am2:Ax, 7ane:Ax
46 6ww7:A 927 19 0.0976 0.0086 0.4211 8.0
47 4kfz:B 148 39 0.1463 0.0811 0.3077 8.3 4kfz:A, 2xjy:A, 2xjz:A, 2xjz:B, 2xjz:C, 2xjz:D, 2xjz:E, 2ypa:C
48 2egq:A 77 56 0.2073 0.2208 0.3036 8.5
49 2ecj:A 58 44 0.1951 0.2759 0.3636 9.2
50 1wig:A 73 60 0.2561 0.2877 0.3500 9.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417