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BioLiP
>protein
GSSGSSGEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDSGPSSG

The query sequence (length=71) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1wes:A 71 71 1.0000 1.0000 1.0000 1.04e-48 2g6q:A
2 1weu:A 91 64 0.6620 0.5165 0.7344 5.12e-33 3c6w:A, 3c6w:C, 2k1j:A, 2m1r:A, 2pnx:A, 2pnx:C, 2vnf:A, 2vnf:C, 1wen:A
3 2qic:A 51 51 0.6338 0.8824 0.8824 5.93e-31
4 1x4i:A 70 80 0.6901 0.7000 0.6125 7.00e-27 7zmx:A, 7zmx:B
5 2jmi:A 60 48 0.4085 0.4833 0.6042 8.03e-18 2jmj:A
6 2mum:A 50 46 0.3662 0.5200 0.5652 2.12e-16
7 1wew:A 78 79 0.4648 0.4231 0.4177 1.30e-09
8 1wem:A 76 81 0.4930 0.4605 0.4321 2.42e-07 4l7x:A, 2m3h:A
9 6j2p:A 98 62 0.3380 0.2449 0.3871 1.33e-05 6j2p:B, 6j2p:D, 6j2p:C
10 4gnd:C 107 34 0.2254 0.1495 0.4706 4.52e-05 4gnd:A, 4gne:A, 4gnf:A, 4gng:A, 4gng:D
11 1wep:A 79 75 0.4225 0.3797 0.4000 4.63e-04
12 1x4j:A 75 83 0.4225 0.4000 0.3614 5.82e-04
13 2naa:A 94 34 0.1972 0.1489 0.4118 6.29e-04
14 3n9m:A 503 45 0.2535 0.0358 0.4000 0.002 3n9l:A, 3n9m:C, 3n9n:A, 3n9o:A, 3n9p:A, 3n9q:A, 3puq:A, 3puq:C, 3pur:A, 3pur:C
15 2k16:A 75 45 0.2535 0.2400 0.4000 0.003 5c13:A, 5c13:C, 5c13:E, 5c13:G, 2k17:A, 5wxg:A, 5wxh:C, 5wxh:A, 5xmy:A, 5xmy:C
16 6ryr:W 708 38 0.2113 0.0212 0.3947 0.003 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
17 5b73:A 313 36 0.2113 0.0479 0.4167 0.009 4cos:A, 7cwh:B, 5y1z:C, 5y1z:D
18 2rsd:A 68 64 0.2535 0.2647 0.2812 0.009
19 3o36:A 184 45 0.2817 0.1087 0.4444 0.012 7b9x:A, 5h1t:A, 5h1t:B, 5h1t:C, 5h1t:D, 5h1u:B, 5h1u:A, 5h1u:C, 5h1u:D, 5h1v:A, 5h1v:B, 3o33:A, 3o33:B, 3o33:C, 3o33:D, 3o34:A, 3o35:B, 3o35:A, 3o36:B, 3o37:A, 3o37:B, 3o37:C, 3o37:D, 4yab:A, 4yab:B, 4yad:A, 4yad:B, 4yat:A, 4yat:B, 4yax:A, 4yax:B, 4ybm:A, 4ybm:B, 4ybs:A, 4ybt:A, 4yc9:A, 4zql:A, 4zql:B
20 3kv4:A 432 60 0.3239 0.0532 0.3833 0.016 4do0:A, 3k3n:A, 3k3o:A, 2wwu:A
21 9c0o:A 63 58 0.2394 0.2698 0.2931 0.023
22 2yql:A 56 65 0.3099 0.3929 0.3385 0.033
23 2miq:A 94 66 0.2958 0.2234 0.3182 0.074
24 2l5u:A 61 41 0.2254 0.2623 0.3902 0.074
25 1we9:A 64 34 0.2113 0.2344 0.4412 0.078
26 6ieu:A 170 42 0.2676 0.1118 0.4524 0.083 6iet:A
27 8i3x:A 60 47 0.2254 0.2667 0.3404 0.12 8i3x:B
28 1wee:A 72 75 0.3944 0.3889 0.3733 0.14
29 2d8q:A 70 76 0.3239 0.3286 0.3026 0.14 2dan:A
30 8bpb:C 126 38 0.2113 0.1190 0.3947 0.19 8bpc:C
31 2puy:B 60 39 0.1831 0.2167 0.3333 0.19 2puy:A
32 8bpa:C 213 38 0.2113 0.0704 0.3947 0.26 8c60:C
33 8bpa:C 213 40 0.1972 0.0657 0.3500 9.7 8c60:C
34 7xga:A 126 28 0.1690 0.0952 0.4286 0.27 6vfo:A
35 3u5m:E 173 47 0.2394 0.0983 0.3617 0.33
36 7ebk:A 183 44 0.2394 0.0929 0.3864 0.34 7ebj:A
37 3u5o:C 195 60 0.2958 0.1077 0.3500 0.46 8bd8:A, 8bd9:A, 8bdy:A, 5mr8:A, 3u5m:A, 3u5m:B, 3u5m:C, 3u5m:D, 3u5m:F, 3u5m:G, 3u5m:H, 3u5m:I, 3u5m:K, 3u5m:J, 3u5m:L, 3u5n:A, 3u5n:B, 3u5o:A, 3u5o:B, 3u5o:D, 3u5o:E, 3u5o:F, 3u5o:G, 3u5o:H, 3u5p:A, 3u5p:B, 3u5p:C, 3u5p:D, 3u5p:E, 3u5p:F, 3u5p:G, 3u5p:H, 7zdd:A
38 5wlf:A 60 58 0.3099 0.3667 0.3793 0.48 5wle:A
39 1mm3:A 61 38 0.2113 0.2459 0.3947 0.50
40 7mju:A 184 34 0.1549 0.0598 0.3235 0.76 5dag:A, 5dah:B, 5dah:A
41 6elq:X 630 43 0.1549 0.0175 0.2558 0.88 6elq:A, 6elq:B
42 8f8y:B 433 61 0.2958 0.0485 0.3443 1.1 8f8y:A, 8f8z:A, 8f8z:B, 3kqi:A, 7m10:A, 3pu3:A, 3pu3:B, 3pu8:B, 3pu8:A, 3pua:A, 3pus:A, 3pus:B
43 6q3m:C 219 38 0.2113 0.0685 0.3947 1.1 6q3m:A, 6q3m:B
44 3kv6:D 448 51 0.2676 0.0424 0.3725 1.3 3kv5:D, 3kv5:A, 3kv6:A, 3kv9:A, 3kva:A, 3u78:A
45 8ihn:M 357 58 0.2958 0.0588 0.3621 1.5 8kd4:E
46 6guu:B 204 38 0.2113 0.0735 0.3947 1.7 6guu:A
47 2yur:A 74 80 0.3380 0.3243 0.3000 1.8
48 8w9c:F 156 58 0.2958 0.1346 0.3621 1.9 8hxx:P, 8hy0:P, 8jho:P, 8w9d:F, 8w9e:F, 8w9f:F
49 5o3w:B 717 22 0.1408 0.0139 0.4545 1.9 5o3u:A, 5o3u:B, 5o3u:C, 5o3u:D, 5o3v:B, 5o3v:A, 5o3w:A, 5o3w:C, 5o3w:D, 5uw3:A, 5uw3:B, 5uw3:C, 5uw5:A, 5uw5:B, 5uw5:C, 5uw6:A, 5uw6:B, 5uw6:C, 5uzw:A, 5uzw:B, 5uzw:C
50 5uw3:D 698 22 0.1408 0.0143 0.4545 2.0 5uw5:D, 5uw6:D, 5uw7:A, 5uw7:B, 5uzw:D
51 4lk9:A 126 24 0.1690 0.0952 0.5000 2.3 5b75:A, 5b76:A, 5b77:A, 5b78:A, 4ljn:A, 4lka:A, 4llb:A, 4llb:B, 2ln0:A, 6lsb:A, 3v43:A
52 5vab:A 54 23 0.1408 0.1852 0.4348 3.4
53 7yi0:F 120 47 0.2535 0.1500 0.3830 3.5
54 7yi2:D 321 47 0.2535 0.0561 0.3830 3.5 7yi0:D, 7yi3:D, 7yi4:D, 7yi5:D
55 8hxx:N 375 47 0.2535 0.0480 0.3830 4.4 8hxy:N, 8hy0:N, 8i3f:B, 8jho:N, 8tof:G, 8w9c:E, 8w9d:E, 8w9e:E, 8w9f:E
56 1weq:A 85 29 0.2113 0.1765 0.5172 4.6
57 8kd6:E 301 47 0.2535 0.0598 0.3830 4.7 8kd2:E
58 4gy5:A 215 25 0.1549 0.0512 0.4400 4.9 3ask:A, 3ask:B, 3ask:D, 3asl:A, 3db3:A, 7fb7:B, 4gy5:B, 6iiw:A, 2lgg:A, 2lgk:A, 2lgl:A, 4qqd:A, 4qqd:B, 3shb:A, 3sou:A, 3sou:B, 3sow:A, 3sow:B, 3sox:A, 3sox:B, 3t6r:B, 3t6r:A, 8wms:A, 5xpi:A, 5yy9:A, 5yy9:B, 3zvy:A, 3zvy:B, 3zvz:B
59 2d9l:A 134 18 0.1408 0.0746 0.5556 5.2 2olm:A
60 6oie:B 111 24 0.1549 0.0991 0.4583 5.5 6oie:A, 5u2j:B, 5u2j:A
61 2mny:A 55 36 0.1972 0.2545 0.3889 5.7 2mnz:A
62 8aaf:e 1527 34 0.1408 0.0065 0.2941 5.8 8agt:e, 8agu:e, 8agv:e, 8agw:e, 8agx:e, 8agz:e
63 4qiw:B 1069 27 0.1690 0.0112 0.4444 6.3 4qiw:J
64 6kf3:B 1114 27 0.1690 0.0108 0.4444 6.3 9bct:B, 9bcu:B, 6kf4:B, 6kf9:B
65 1f62:A 51 24 0.1408 0.1961 0.4167 7.2
66 1hyu:A 521 14 0.1127 0.0154 0.5714 7.3 1fl2:A, 4o5q:A, 4o5u:A, 4xvg:A, 4ykf:A, 4ykg:A
67 1tz3:A 299 14 0.1127 0.0268 0.5714 7.7 1tz6:A, 1tz6:B
68 7klo:A 59 55 0.2535 0.3051 0.3273 7.7 7klr:A
69 3dty:A 374 32 0.1549 0.0294 0.3438 7.9 3dty:E
70 2e6r:A 92 34 0.1831 0.1413 0.3824 7.9
71 1peu:A 692 27 0.1408 0.0145 0.3704 8.2 2bq1:E, 2bq1:F, 1peo:A, 1peq:A
72 2l43:A 80 21 0.1127 0.1000 0.3810 8.7 2ku3:A
73 8k2m:A 559 13 0.0986 0.0125 0.5385 8.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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