Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GSLLKPARFMCLPCGIAFSSPSTLEAHQAYYCSHRI

The query sequence (length=36) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1fv5:A 36 36 1.0000 1.0000 1.0000 1.61e-21 2l6z:B, 1y0j:B
2 1fu9:A 36 35 0.3056 0.3056 0.3143 0.074 1jn7:A
3 2emf:A 46 27 0.3056 0.2391 0.4074 0.077
4 2emp:A 46 32 0.3611 0.2826 0.4062 0.22
5 2yt9:A 95 27 0.3333 0.1263 0.4444 0.27
6 2n26:A 55 23 0.2500 0.1636 0.3913 0.30
7 2ema:A 46 29 0.2778 0.2174 0.3448 0.33
8 2en4:A 46 35 0.3333 0.2609 0.3429 0.33
9 3zzm:A 520 21 0.3333 0.0231 0.5714 0.42 4a1o:A, 4a1o:B
10 1x6e:A 72 25 0.3333 0.1667 0.4800 0.49
11 1x6e:A 72 27 0.2778 0.1389 0.3704 2.1
12 2eq3:A 46 27 0.3056 0.2391 0.4074 0.53
13 2eq2:A 46 27 0.2778 0.2174 0.3704 1.1 2ytr:A
14 2eow:A 46 27 0.2778 0.2174 0.3704 1.2
15 2yto:A 46 27 0.2778 0.2174 0.3704 1.2
16 2ely:A 46 27 0.2500 0.1957 0.3333 1.4
17 2ytm:A 46 27 0.2500 0.1957 0.3333 1.4
18 1mey:F 84 20 0.2500 0.1071 0.4500 1.4 1mey:C
19 1mey:F 84 20 0.2500 0.1071 0.4500 1.8 1mey:C
20 2en6:A 46 27 0.2778 0.2174 0.3704 1.4
21 2emh:A 46 27 0.2500 0.1957 0.3333 1.4
22 7w1m:H 322 22 0.2500 0.0280 0.4091 1.6 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
23 2en1:A 46 27 0.2500 0.1957 0.3333 1.8 2yth:A
24 2cot:A 77 21 0.2500 0.1169 0.4286 1.8
25 1bbo:A 57 20 0.2222 0.1404 0.4000 1.8 3znf:A, 4znf:A
26 5wjq:D 281 20 0.3056 0.0391 0.5500 2.0 5v3j:E, 5v3j:F, 5v3m:C
27 2ysp:A 46 27 0.2222 0.1739 0.2963 2.2
28 8tho:A 100 28 0.3056 0.1100 0.3929 2.2 8dtn:F, 6ki6:A, 6ki6:B, 8tlo:A, 6u9q:A
29 2emg:A 46 27 0.2500 0.1957 0.3333 2.2
30 1x6h:A 86 22 0.2500 0.1047 0.4091 2.4
31 2eps:A 54 19 0.2222 0.1481 0.4211 2.5
32 2emi:A 46 20 0.2778 0.2174 0.5000 2.5 2ytp:A
33 2ytj:A 46 27 0.2500 0.1957 0.3333 2.6
34 2i13:A 151 20 0.2500 0.0596 0.4500 2.8
35 2i13:A 151 20 0.2222 0.0530 0.4000 8.3
36 2ep3:A 46 27 0.2500 0.1957 0.3333 2.9
37 2emj:A 46 27 0.2778 0.2174 0.3704 2.9
38 2eq1:A 46 27 0.2500 0.1957 0.3333 3.0
39 2i13:B 144 20 0.2500 0.0625 0.4500 3.0
40 2i13:B 144 20 0.2222 0.0556 0.4000 9.0
41 2epx:A 47 23 0.2500 0.1915 0.3913 3.2
42 2emw:A 44 28 0.2778 0.2273 0.3571 3.8
43 8a4i:L 56 19 0.2222 0.1429 0.4211 4.1 8a4i:I, 8a4i:K, 8a4i:J, 8cuc:F, 8cuc:G, 7y3i:B, 7y3i:A, 7y3k:A, 7y3k:B
44 8a4i:L 56 18 0.2500 0.1607 0.5000 6.1 8a4i:I, 8a4i:K, 8a4i:J, 8cuc:F, 8cuc:G, 7y3i:B, 7y3i:A, 7y3k:A, 7y3k:B
45 7y3l:A 57 21 0.2500 0.1579 0.4286 4.3
46 7y3l:A 57 23 0.2222 0.1404 0.3478 5.2
47 2epz:A 46 27 0.2500 0.1957 0.3333 4.3
48 2eor:A 46 27 0.2500 0.1957 0.3333 4.3
49 6tly:A 99 24 0.2500 0.0909 0.3750 4.7
50 2em6:A 46 27 0.2500 0.1957 0.3333 4.8
51 2d9h:A 78 22 0.2500 0.1154 0.4091 5.4
52 4aoo:A 143 24 0.2500 0.0629 0.3750 5.7 4ao5:A, 4ao5:B, 4ao5:C, 4ao5:D, 4ao5:E, 4ao5:F, 4aoo:B, 4aoo:C, 4aoo:D, 4aoz:A, 4aoz:B, 4aoz:C, 4apz:1, 4apz:Y, 4apz:2, 4apz:3, 4apz:4, 4apz:5, 4apz:7, 4apz:6, 4apz:8, 4apz:9, 4apz:a, 4apz:A, 4apz:C, 4apz:B, 4apz:D, 4apz:E, 4apz:F, 4apz:G, 4apz:I, 4apz:H, 4apz:J, 4apz:K, 4apz:L, 4apz:M, 4apz:N, 4apz:O, 4apz:P, 4apz:R, 4apz:Q, 4apz:S, 4apz:U, 4apz:T, 4apz:V, 4apz:W, 4apz:X, 4apz:Z, 4apz:b, 4apz:d, 4apz:c, 4apz:e, 4apz:g, 4apz:f, 4apz:h, 4apz:j, 4apz:i, 4apz:k, 4apz:m, 4apz:l, 4b0h:A, 4b0h:B, 4b0h:C, 2xce:A, 2xce:B, 2xce:C, 2xce:D, 2xce:E, 2xce:F, 2xy3:A, 2xy3:B, 2xy3:C, 2xy3:D, 2xy3:E, 2xy3:F
53 2yrj:A 46 27 0.2222 0.1739 0.2963 6.0
54 6ml4:A 143 19 0.2222 0.0559 0.4211 6.3 6ml2:A, 6ml3:A, 6ml5:A, 6ml6:A, 6ml7:A
55 1zu1:A 127 21 0.2778 0.0787 0.4762 7.2
56 6e93:A 112 19 0.2500 0.0804 0.4737 7.6 6e94:A
57 2eov:A 46 27 0.2500 0.1957 0.3333 7.6
58 2eok:A 42 23 0.2500 0.2143 0.3913 7.8
59 2lce:A 64 19 0.1944 0.1094 0.3684 8.9
60 8fjl:D 1138 25 0.2222 0.0070 0.3200 9.1 8fjk:E, 8fjk:G, 8fjk:I, 8fjk:K, 8fjl:E, 8fjl:G, 8fjl:I, 8fjl:K, 6m99:C
61 2lvh:A 45 19 0.1944 0.1556 0.3684 9.2
62 5yax:B 230 24 0.2778 0.0435 0.4167 9.8

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218