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BioLiP
>protein
GPLGSDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDA

The query sequence (length=62) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2f6j:A 168 57 0.9194 0.3393 1.0000 2.68e-38 8ag2:A, 6aze:A, 7dmy:A, 7dn4:A, 7dn4:B, 7dn4:C, 7dn4:D, 7dn4:E, 7dn4:F, 7f5c:A, 7f5d:A, 7f5e:A, 2f6j:B, 2f6j:C, 2f6n:A, 2f6n:B, 8f6g:A, 2fsa:A, 2fsa:B, 2fsa:C, 2fuu:A, 5h6y:A, 7k6r:A, 7k6s:A, 7kdw:A, 7kdw:B, 7kdz:A, 7lp0:A, 7lp0:B, 7lpk:A, 7lpk:B, 7lrk:A, 7lrk:B, 7lro:A, 7lro:B, 6lu5:A, 6lu6:A, 7m2e:A, 8ou2:A, 8ou2:B, 3qzs:A, 3qzs:B, 3qzt:A, 3qzv:A, 5r4g:A, 5r4h:A, 5r4i:A, 5r4j:A, 5r4k:A, 5r4l:A, 5r4m:A, 5r4n:A, 2ri7:A, 7rwn:A, 7rwo:A, 7rwp:A, 7rwq:A, 7vd4:A
2 3kv6:D 448 48 0.3871 0.0536 0.5000 3.07e-15 3kv5:D, 3kv5:A, 3kv6:A, 3kv9:A, 3kva:A, 3u78:A
3 8f8y:B 433 51 0.4194 0.0600 0.5098 3.20e-15 8f8y:A, 8f8z:A, 8f8z:B, 3kqi:A, 7m10:A, 3pu3:A, 3pu3:B, 3pu8:B, 3pu8:A, 3pua:A, 3pus:A, 3pus:B
4 3kv4:A 432 49 0.4032 0.0579 0.5102 1.38e-14 4do0:A, 3k3n:A, 3k3o:A, 2wwu:A
5 1wep:A 79 53 0.3871 0.3038 0.4528 1.00e-13
6 1wem:A 76 54 0.3871 0.3158 0.4444 7.70e-13 4l7x:A, 2m3h:A
7 9c0o:A 63 53 0.4032 0.3968 0.4717 9.13e-13
8 5z8l:A 204 53 0.3387 0.1029 0.3962 6.45e-11 5z8n:A, 5z8n:B, 5z8n:C
9 5yc3:A 60 60 0.4194 0.4333 0.4333 6.81e-11 5yc4:A
10 5y20:A 52 44 0.3387 0.4038 0.4773 3.62e-10
11 5wlf:A 60 60 0.3710 0.3833 0.3833 5.05e-10 5wle:A
12 1we9:A 64 46 0.3226 0.3125 0.4348 1.26e-09
13 5tab:A 53 57 0.4032 0.4717 0.4386 9.38e-09
14 6j2p:A 98 50 0.3226 0.2041 0.4000 1.26e-08 6j2p:B, 6j2p:D, 6j2p:C
15 3n9m:A 503 34 0.2742 0.0338 0.5000 1.53e-08 3n9l:A, 3n9m:C, 3n9n:A, 3n9o:A, 3n9p:A, 3n9q:A, 3puq:A, 3puq:C, 3pur:A, 3pur:C
16 5znp:B 186 48 0.2419 0.0806 0.3125 3.44e-07 5znp:A, 5znr:A, 5znr:B
17 2k16:A 75 47 0.3226 0.2667 0.4255 8.32e-07 5c13:A, 5c13:C, 5c13:E, 5c13:G, 2k17:A, 5wxg:A, 5wxh:C, 5wxh:A, 5xmy:A, 5xmy:C
18 1wee:A 72 49 0.2903 0.2500 0.3673 2.59e-06
19 5tbn:A 57 50 0.3226 0.3509 0.4000 3.30e-05
20 2lv9:A 80 57 0.3387 0.2625 0.3684 2.31e-04 4l58:A
21 5tdr:A 70 52 0.3065 0.2714 0.3654 0.001 5tdw:A
22 7y0i:A 56 53 0.2903 0.3214 0.3396 0.007
23 6o7g:B 60 33 0.1774 0.1833 0.3333 0.014 8u2y:B
24 5oqd:C 192 33 0.1613 0.0521 0.3030 0.015 5oqd:B, 5oqd:A, 5oqd:D, 5oqd:E, 5oqd:F
25 2ma5:A 61 51 0.2903 0.2951 0.3529 0.045
26 5xfr:A 309 52 0.2742 0.0550 0.3269 0.054 5xfr:B
27 3o70:A 55 50 0.2258 0.2545 0.2800 0.058 3o7a:A
28 5c11:A 52 45 0.2581 0.3077 0.3556 0.092 3gl6:A, 2kgg:A, 2kgi:A
29 5mmj:j 99 53 0.2258 0.1414 0.2642 0.096 6eri:BJ, 5mmm:j, 4v61:AJ, 5x8p:j, 5x8r:j
30 2m85:A 65 53 0.2581 0.2462 0.3019 0.12
31 6f2p:A 1040 17 0.1290 0.0077 0.4706 0.35
32 2xb1:C 97 37 0.1774 0.1134 0.2973 0.80 4up0:A, 4up5:A, 2xb1:A
33 2rsd:A 68 36 0.2258 0.2059 0.3889 1.6
34 1mm3:A 61 56 0.3065 0.3115 0.3393 1.7
35 5xfo:A 315 51 0.2097 0.0413 0.2549 2.5 8h43:A, 8h43:B, 8h43:C, 4hcz:A, 4hcz:B, 7lky:B, 7lky:H, 7lky:A, 7lky:C, 7lky:D, 7lky:E, 7lky:F, 7lky:G, 6wat:AA, 6wat:AC, 6wat:BA, 6wat:BC, 6wat:CA, 6wat:CC, 6wat:DA, 6wat:DC, 6wat:EC, 6wat:EA, 6wat:FA, 6wat:FC, 6wat:GA, 6wat:GC, 6wat:HA, 6wat:HC, 6wat:IA, 6wat:IC, 6wat:JA, 6wat:JC, 6wat:KA, 6wat:KC, 6wat:OC, 6wat:LA, 6wat:LC, 6wat:MA, 6wat:MC, 6wat:NA, 6wat:NC, 6wat:OA, 6wav:A, 6wav:C, 6wav:B, 6wav:D, 5xfn:A, 5xfp:B, 5xfp:A, 5xfp:E, 5xfq:A, 5xfq:B
36 6u04:A 168 64 0.2742 0.1012 0.2656 2.5 5erc:A
37 6ryr:W 708 31 0.1774 0.0155 0.3548 3.7 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
38 3h0g:B 1150 20 0.1290 0.0070 0.4000 5.6 3h0g:N
39 2ysm:A 111 61 0.2581 0.1441 0.2623 6.6
40 4gy5:A 215 34 0.1774 0.0512 0.3235 6.6 3ask:A, 3ask:B, 3ask:D, 3asl:A, 3db3:A, 7fb7:B, 4gy5:B, 6iiw:A, 2lgg:A, 2lgk:A, 2lgl:A, 4qqd:A, 4qqd:B, 3shb:A, 3sou:A, 3sou:B, 3sow:A, 3sow:B, 3sox:A, 3sox:B, 3t6r:B, 3t6r:A, 8wms:A, 5xpi:A, 5yy9:A, 5yy9:B, 3zvy:A, 3zvy:B, 3zvz:B
41 5b73:A 313 37 0.2097 0.0415 0.3514 9.2 4cos:A, 7cwh:B, 5y1z:C, 5y1z:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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