BioLiP

>protein
GGTDPATMVNNICTFILGPFGQSLAVLGIVAIGISWMFGRASLGLVAGVVGGIVIMFGASFLGKTLTGGG

The query sequence (length=70) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8cue:1A	70	70	1.0000	1.0000	1.0000	2.41e-42	8cue:5B, 8cue:1B, 8cue:5C, 8cue:1C, 8cue:5D, 8cue:1D, 8cue:5E, 8cue:1E, 8cue:5F, 8cue:1F, 8cue:5G, 8cue:1G, 8cue:5H, 8cue:1H, 8cue:5I, 8cue:1I, 8cue:5J, 8cue:1J, 8cue:5K, 8cue:1K, 8cue:5L, 8cue:1L, 8cue:5M, 8cue:1M, 8cue:5N, 8cue:1N, 8cue:2A, 8cue:2B, 8cue:2C, 8cue:2D, 8cue:2E, 8cue:2F, 8cue:2G, 8cue:2H, 8cue:2I, 8cue:2J, 8cue:2K, 8cue:2L, 8cue:2M, 8cue:2N, 8cue:3A, 8cue:3B, 8cue:3C, 8cue:3D, 8cue:3E, 8cue:3F, 8cue:3G, 8cue:3H, 8cue:3I, 8cue:3J, 8cue:3K, 8cue:3L, 8cue:3M, 8cue:3N, 8cue:4A, 8cue:4B, 8cue:4C, 8cue:4D, 8cue:4E, 8cue:4F, 8cue:4G, 8cue:4H, 8cue:4I, 8cue:4J, 8cue:4K, 8cue:4L, 8cue:4M, 8cue:4N, 8cue:5A, 8exh:A, 8exh:E, 8exh:B, 8exh:C, 8exh:D, 8exh:F, 8exh:G, 8exh:H, 8exh:I, 8exh:J, 8exh:K, 8exh:L, 8exh:M, 8exh:N, 8exh:O, 8exh:P, 8exh:Q, 8exh:R, 8exh:S, 8exh:T, 8exh:U, 8exh:V, 8exh:W, 8exh:X, 8exh:Y, 8exh:Z, 8exh:a, 8exh:b, 8exh:c, 8exh:d, 8exh:e, 8exh:f, 8exh:g, 8exh:h, 8exh:i, 8exh:j, 8exh:k, 8exh:l, 8exh:m, 8exh:n, 8fai:A, 8fai:B, 8fai:F, 8fai:C, 8fai:G, 8fai:D, 8fai:H, 8fai:E, 8fai:I, 8fai:J, 8fai:K, 8fai:L, 8fai:M, 8fai:N, 8fai:O
2	7w1y:2	706	13	0.1286	0.0127	0.6923	3.3	7pfo:2, 7plo:2, 8q6o:A, 8q6o:2, 8q6p:2, 7w1y:A, 6xtx:2, 6xty:2
3	5m45:B	709	33	0.1714	0.0169	0.3636	4.4	5m45:E, 5m45:H, 5m45:K, 5svb:B, 5svb:E
4	2yeq:A	522	15	0.1143	0.0153	0.5333	9.5	2yeq:B

[Back]