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BioLiP
>protein
GASIFRCRQCGQTISRRDWCFSLAQGLRLIIALCGQCGSHLGWIKDRLAEGPA

The query sequence (length=53) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8aop:C 53 53 1.0000 1.0000 1.0000 2.17e-33
2 8ou6:C 57 57 0.9623 0.8947 0.8947 7.77e-28 7pjk:C
3 5amj:C 69 67 1.0000 0.7681 0.7910 3.02e-26 8bc6:C, 8c3h:C, 5oh3:C, 8rds:C
4 5oh7:C 82 82 1.0000 0.6463 0.6463 9.45e-24
5 6r1x:C 84 84 1.0000 0.6310 0.6310 1.09e-23 5ami:C, 6r13:C
6 7ps9:C 90 89 1.0000 0.5889 0.5955 6.63e-23 8ou3:C, 8ou4:C, 8ou5:C
7 5oh8:C 46 53 0.8491 0.9783 0.8491 5.29e-22 8aoq:C
8 6r1a:A 112 106 1.0000 0.4732 0.5000 2.47e-20 5amh:A, 5ami:A, 5ami:B, 5amj:A, 5amj:B, 5amk:A, 5amk:B, 5amk:C, 5amk:D, 8aop:A, 8aop:B, 8aoq:A, 8aoq:B, 8bc6:A, 8bc6:B, 8bc7:B, 8bc7:A, 8bc7:C, 8c3h:A, 8c3h:B, 5oh1:A, 5oh1:B, 5oh1:C, 5oh2:A, 5oh2:B, 5oh2:C, 5oh3:A, 5oh3:B, 5oh4:A, 5oh4:B, 5oh4:C, 5oh7:A, 5oh7:B, 5oh8:A, 5oh8:B, 5oh9:A, 5oh9:B, 5oh9:C, 5oha:A, 5oha:B, 5oha:C, 5ohb:A, 5ohb:B, 5ohb:C, 8ou3:A, 8ou3:B, 8ou4:A, 8ou4:B, 8ou5:A, 8ou5:B, 8ou6:A, 8ou6:B, 8ou7:A, 8ou7:B, 8ou7:C, 8ou9:A, 8ou9:B, 8ou9:C, 8oua:A, 8oua:B, 8oua:C, 7pjk:A, 7pjk:B, 7ps9:A, 7ps9:B, 7pso:A, 7pso:B, 7pso:C, 6r0q:A, 6r0q:C, 6r0q:B, 6r0q:D, 6r0s:A, 6r0s:B, 6r0s:C, 6r0u:A, 6r0u:B, 6r0u:C, 6r0v:A, 6r0v:B, 6r0v:C, 6r11:A, 6r11:B, 6r11:C, 6r12:A, 6r12:B, 6r12:C, 6r13:A, 6r13:B, 6r18:C, 6r18:A, 6r18:B, 6r19:B, 6r19:A, 6r19:C, 6r1a:B, 6r1a:C, 6r1c:A, 6r1c:B, 6r1c:C, 6r1d:A, 6r1d:B, 6r1k:A, 6r1k:B, 6r1k:C, 6r1w:A, 6r1w:B, 6r1w:C, 6r1x:A, 6r1x:B, 8rdp:A, 8rdp:B, 8rdp:C, 8rdq:A, 8rdq:B, 8rdq:C, 8rdr:A, 8rdr:B, 8rdr:C, 8rds:A, 8rds:B, 8rdt:A, 8rdt:B, 8rdt:C, 7shh:A, 7shh:B, 7shh:C, 4v2y:A, 4v2y:B, 4v2y:C, 4v2z:A, 4v2z:B, 4v2z:C, 4v30:A, 4v30:B, 4v30:C, 4v31:A, 4v31:B, 4v31:C, 4v32:A, 4v32:B, 4v32:C
9 2jox:A 106 32 0.1887 0.0943 0.3125 0.20
10 6q9v:B 145 30 0.2264 0.0828 0.4000 0.32 6q9v:A, 6qa0:A, 6qa0:B
11 3cxk:A 131 35 0.2075 0.0840 0.3143 0.77 3cez:A, 3cez:B, 3cxk:B
12 6sym:A 135 34 0.2075 0.0815 0.3235 1.2 6sym:B
13 2i13:A 151 18 0.1509 0.0530 0.4444 1.6
14 2i13:A 151 18 0.1321 0.0464 0.3889 9.1
15 4ci1:B 370 18 0.1698 0.0243 0.5000 2.3 4ci2:B, 4ci3:B
16 2oba:B 121 22 0.1509 0.0661 0.3636 3.0 2oba:A, 2oba:C, 2oba:D, 2oba:E, 2oba:F
17 3gon:A 329 34 0.2075 0.0334 0.3235 3.3
18 8rq9:A 316 18 0.1509 0.0253 0.4444 3.9 8rq1:A, 8rq8:A, 8rq9:C, 8rqa:A, 8rqc:A, 8rqc:D
19 6m8t:A 189 18 0.1698 0.0476 0.5000 5.3 6m8u:A
20 7cgu:A 352 34 0.2642 0.0398 0.4118 5.8
21 6h0g:B 401 18 0.1509 0.0200 0.4444 6.4 6bn7:B, 6bn8:B, 6bn9:B, 6bnb:B, 6boy:B, 7bqu:A, 7bqv:A, 8cvp:B, 8d7u:B, 8d7v:B, 8d7w:B, 8d7x:B, 8d7y:B, 8d7z:B, 8d80:B, 8d81:B, 8dey:A, 8dey:D, 5fqd:B, 8g66:B, 6h0f:B, 6h0f:E, 6h0f:H, 6h0f:K, 6h0g:E, 5hxb:Z, 5hxb:C, 7lps:B, 7lps:E, 7lps:H, 7lps:K, 8oiz:B, 8ojh:B, 8tnp:B, 8tnq:B, 8tnr:B, 4tzc:B, 4tzc:D, 8tzx:A, 8tzx:D, 8u15:A, 8u15:D, 8u16:A, 8u16:D, 8u17:D, 7u8f:A, 7u8f:D, 8uh6:B, 5v3o:C, 3wx1:A, 3wx1:B, 3wx2:A, 3wx2:B, 6xk9:Z, 6xk9:C, 5yiz:A, 5yiz:D, 5yiz:G, 5yiz:t, 5yj0:A, 5yj0:D, 5yj0:G, 5yj0:t, 5yj1:A, 5yj1:D, 5yj1:G, 5yj1:t
22 5fqd:E 367 18 0.1509 0.0218 0.4444 6.5 4tz4:C, 8u17:A, 6uml:C
23 2jne:A 71 27 0.1887 0.1408 0.3704 6.9
24 8j1j:B 387 11 0.1321 0.0181 0.6364 7.1 8j12:B, 8j3r:B
25 8j12:A 424 11 0.1321 0.0165 0.6364 7.1 8dzj:A, 8dzj:B, 8j1j:A, 8j3r:A, 7wju:A, 7wju:B
26 5o96:D 243 30 0.1887 0.0412 0.3333 7.2 5o96:A, 5o96:B, 5o96:C, 5o96:E, 5o96:F, 5o96:G, 5o96:H
27 2i13:B 144 18 0.1321 0.0486 0.3889 8.6
28 1mey:F 84 19 0.1321 0.0833 0.3684 9.4 1mey:C
29 6rxt:US 451 32 0.1509 0.0177 0.2500 9.9 6rxu:US, 6rxv:US, 6rxy:US, 6rxz:US

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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