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BioLiP
>protein
FPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKRE
AEYFQLPDLVKLLT

The query sequence (length=94) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6ocp:B 99 96 1.0000 0.9495 0.9792 3.38e-63 6m8r:A, 6m8r:F, 6ocp:C, 6ocp:D, 6ocp:E, 6ocp:F, 6ocp:G, 6ocp:H, 6ocp:K, 6ocp:L, 6ocp:M, 6ocp:N
2 6sga:FS 277 67 0.2766 0.0939 0.3881 3.88e-04 6sga:FQ, 6sga:FR, 6sga:FU, 6sgb:FQ, 6sgb:FR, 6sgb:FU
3 7e8e:D 459 72 0.2340 0.0479 0.3056 0.007 7e87:B, 7e87:A, 7e87:C, 7e87:D, 7e8e:B, 1nn7:A, 7ukg:A, 7ukg:B, 7ukg:C, 7ukg:D
4 8quc:A 395 72 0.2447 0.0582 0.3194 0.010 8f1c:A, 8f1c:B, 8f1c:C, 8f1c:D, 8f1d:A, 8f1d:B, 8f1d:C, 8f1d:D, 7phi:C, 7phi:B, 7phi:D, 8quc:B, 8quc:D, 8quc:C, 8qud:A, 8qud:B, 8qud:C, 8qud:D
5 2i2r:L 138 68 0.2340 0.1594 0.3235 0.010 2i2r:A, 2i2r:C, 2i2r:D, 2i2r:I, 2i2r:J, 2i2r:K, 2nz0:B, 2nz0:D, 1s1g:A, 1s1g:B
6 2i2r:B 124 68 0.2340 0.1774 0.3235 0.011
7 7ukh:A 203 72 0.2340 0.1084 0.3056 0.024 7ukh:B, 7ukh:C, 7ukh:D
8 8osg:F 258 88 0.2766 0.1008 0.2955 0.17
9 1t3q:B 786 35 0.1489 0.0178 0.4000 0.43 1t3q:E
10 5juy:B 1234 73 0.2660 0.0203 0.3425 0.80 1cy5:A, 3j2t:A, 3j2t:B, 3j2t:C, 3j2t:D, 3j2t:E, 3j2t:F, 3j2t:G, 3jbt:A, 3jbt:C, 3jbt:E, 3jbt:G, 3jbt:I, 3jbt:K, 3jbt:M, 5juy:A, 5juy:C, 5juy:D, 5juy:E, 5juy:F, 5juy:G, 2p1h:A, 5wve:A, 5wve:C, 5wve:E, 5wve:G, 5wve:I, 5wve:K, 5wve:M, 1z6t:A, 1z6t:B, 1z6t:C, 1z6t:D
11 8g4c:B 248 71 0.2021 0.0766 0.2676 0.90 8g4c:C, 8g4d:B, 8g4d:C, 7tch:B, 7tch:C
12 8iuf:C1 495 41 0.1702 0.0323 0.3902 0.94 8iuj:c1, 8iuj:C1
13 6p25:A 731 57 0.1915 0.0246 0.3158 6.1 6p2r:A
14 4ttb:A 189 18 0.0851 0.0423 0.4444 7.6 4ttb:B
15 7nhk:0 495 45 0.1489 0.0283 0.3111 8.9
16 4ttc:A 220 18 0.0851 0.0364 0.4444 9.4 4ttc:B, 4ttc:C, 4ttc:D, 4ttc:E, 4ttc:F, 5yak:A, 5yak:F, 5yak:B, 5yak:C, 5yak:D, 5yak:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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