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BioLiP
>protein
FEIPDDVPLPAGWEMAKTSPGQRYFLNHIDQTTTWQDPRK

The query sequence (length=40) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1jmq:A 46 40 0.9500 0.8261 0.9500 3.89e-24 1k5r:A, 1k9q:A, 1k9r:A, 2lax:A, 2lay:A, 2ltw:A
2 2ltv:A 36 32 0.4500 0.5000 0.5625 1.13e-08 2law:A
3 6jjz:B 96 38 0.5000 0.2083 0.5263 2.20e-08 6jjz:A, 6kkg:A, 6kkg:B
4 6jjz:B 96 30 0.2500 0.1042 0.3333 0.65 6jjz:A, 6kkg:A, 6kkg:B
5 4lcd:A 419 32 0.4500 0.0430 0.5625 9.87e-08 4lcd:B
6 2jmf:A 43 35 0.4000 0.3721 0.4571 1.21e-07
7 6jjy:A 128 34 0.4000 0.1250 0.4706 3.84e-07 6j68:A, 6j68:B, 6j69:A, 6jjw:A, 6jjx:B, 6jjx:A
8 6jjy:A 128 37 0.4000 0.1250 0.4324 0.035 6j68:A, 6j68:B, 6j69:A, 6jjw:A, 6jjx:B, 6jjx:A
9 2djy:A 42 32 0.4000 0.3810 0.5000 7.28e-07
10 5dws:C 40 32 0.4250 0.4250 0.5312 8.09e-07
11 5cq2:A 76 32 0.4250 0.2237 0.5312 1.34e-06 5dws:A, 5dws:E, 5dws:G, 5dzd:A, 5dzd:B, 2jo9:A, 4rof:A, 4rof:B
12 5cq2:A 76 32 0.4500 0.2368 0.5625 8.65e-06 5dws:A, 5dws:E, 5dws:G, 5dzd:A, 5dzd:B, 2jo9:A, 4rof:A, 4rof:B
13 2lb1:A 35 32 0.4000 0.4571 0.5000 1.58e-06 2ltx:A
14 7lp2:E 37 30 0.3750 0.4054 0.5000 2.51e-06 2lb2:A, 7lp2:A, 7lp2:C, 2lty:A
15 2kxq:A 90 32 0.4000 0.1778 0.5000 2.69e-06 2laz:A, 2lb0:A, 2ltz:A
16 2kxq:A 90 31 0.3750 0.1667 0.4839 0.001 2laz:A, 2lb0:A, 2ltz:A
17 2m3o:W 43 31 0.3750 0.3488 0.4839 3.65e-06 2kpz:A, 2kq0:A, 2mpt:A, 4n7h:A
18 2laj:A 40 31 0.4000 0.4000 0.5161 4.69e-06
19 1i5h:W 50 32 0.3750 0.3000 0.4688 1.15e-05
20 7lp3:A 37 35 0.3750 0.4054 0.4286 6.77e-05 7lp3:C
21 2ez5:W 46 36 0.3500 0.3043 0.3889 8.54e-05
22 2n8t:A 39 30 0.3250 0.3333 0.4333 2.40e-04
23 8sg2:A 163 38 0.3750 0.0920 0.3947 0.001 6dun:A, 6dun:B, 7efj:A, 7efx:A, 7ekv:A, 7f0m:A, 7f0m:C, 7f0m:B, 7f0m:D, 1f8a:B, 4gwv:A, 3i6c:A, 3i6c:B, 1i8g:B, 1i8h:B, 3ikd:A, 3ikd:B, 3ikg:A, 3ikg:B, 9inr:A, 9inr:B, 2itk:A, 3jyj:A, 3jyj:B, 3kab:A, 3kac:A, 3kac:B, 3kad:A, 3kaf:A, 3kag:A, 3kah:A, 3kai:A, 3kce:A, 2lb3:A, 2n1o:A, 1nmw:A, 3ntp:A, 6o33:A, 6o34:A, 3odk:A, 3oob:A, 1pin:A, 2q5a:A, 3tc5:A, 3tcz:A, 3tdb:A, 4tns:A, 4tyo:A, 4tyo:B, 5uy9:A, 6vaj:A, 3wh0:A, 2xp3:A, 2xp4:A, 2xp5:A, 2xp6:A, 2xp7:A, 2xp8:A, 2xp9:A, 2xpa:A, 2xpb:A
24 2nc3:A 33 30 0.2750 0.3333 0.3667 0.020 2nc4:A, 2nc5:A, 2nc6:A
25 1eg4:A 260 27 0.2750 0.0423 0.4074 0.057
26 2jup:W 37 28 0.2250 0.2432 0.3214 1.0 2rly:W, 2rm0:W
27 7qep:P3 86 24 0.2500 0.1163 0.4167 1.2
28 9fdv:B 419 25 0.2250 0.0215 0.3600 1.3 9fdj:B, 9fdj:D, 9fdk:B, 9fdk:D, 9fdv:D, 9fe0:B, 9fe0:D, 9fe5:B, 9fe5:D, 9fe7:B, 9fe7:D, 9fe8:B, 9fe8:D, 9fea:B, 9fea:D, 9fif:B, 9fif:D, 9fih:B, 9fih:D, 9fii:B, 9fii:D, 9fij:B, 9fij:D, 9fil:B, 9fil:D, 6hl2:B, 6hl2:D, 6hl3:B, 6hl3:D, 6hl4:B, 6hl4:D, 6hla:B, 6hla:D, 6hli:B, 6hli:D, 6hlj:B, 6hlj:D, 6hlm:B, 6hlm:D, 7q5y:C, 7q5y:I, 7q5y:O, 7q5y:U, 6q9c:B, 6q9c:D, 6q9g:B, 6q9g:D, 6q9j:B, 6q9j:D, 6q9k:B, 6q9k:D, 8qg1:B, 8qg1:D, 8qgw:B, 8qgw:D, 8qh4:B, 8qh4:D, 8qh7:B, 8qh7:D, 8qhk:B, 8qhk:D, 6r7p:B, 6r7p:D, 6saq:B, 6saq:D
29 6wil:A 536 46 0.3750 0.0280 0.3261 1.4
30 7pup:A 479 13 0.1750 0.0146 0.5385 2.2
31 6z1p:Bf 337 29 0.2500 0.0297 0.3448 2.4
32 3b69:A 626 28 0.3000 0.0192 0.4286 3.9 2ah2:A, 1ms0:A, 1ms0:B, 1ms1:A, 1ms1:B, 1ms8:A, 1ms8:B, 1ms9:A, 1ms9:B, 3pjq:A, 1s0i:A, 1s0j:A
33 4q2d:A 927 18 0.2250 0.0097 0.5000 5.2
34 5zbm:B 353 26 0.2250 0.0255 0.3462 5.7 1al7:A, 1al8:A, 1gox:A, 1gyl:A, 5zbm:A
35 4gr5:C 457 36 0.2750 0.0241 0.3056 5.9 4gr5:A, 4gr5:B, 4gr5:D
36 7r55:B 325 29 0.3000 0.0369 0.4138 6.1 7qe3:BBB, 7r55:A
37 5jzx:A 364 24 0.2250 0.0247 0.3750 6.6 5jzx:C, 5jzx:D, 5jzx:F
38 5ahk:A 555 32 0.2000 0.0144 0.2500 8.7 5ahk:B
39 2wr8:A 258 23 0.2250 0.0349 0.3913 9.5 1wu8:A, 1wu8:B, 1wu8:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417