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BioLiP
>protein
ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLALRQRTSARFFENRRAWLDNKKIELPEPLALNLSDNDVALA
ERPEEEQVAGFEAAFARAMAECDFILIDTPGGDSAITRMAHGRADLVVTPMNDSFVDFDMLGTVDPVTLELTKPSLYSLT
VWEGRKQRALSGQAMDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLSPQPVPV
SLQHLAARQELRALMHSLGLSAYSG

The query sequence (length=265) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2xj9:A 265 268 0.9849 0.9849 0.9739 0.0 2xj9:B
2 5u1g:D 211 142 0.1509 0.1896 0.2817 2.40e-06 4dzz:A, 4dzz:B, 4e03:A, 4e03:B, 4e07:A, 4e07:B, 4e09:A, 5u1g:B, 5u1g:C, 5u1g:A
3 5tvk:B 242 148 0.1434 0.1570 0.2568 5.94e-05 3k9g:A, 5tvk:A
4 4v02:A 244 149 0.1774 0.1926 0.3154 1.93e-04 4v02:B, 4v03:A, 4v03:B
5 2bej:A 245 214 0.2113 0.2286 0.2617 4.07e-04 2bek:A, 2bek:B, 2bek:C, 2bek:D
6 6iub:A 264 168 0.1509 0.1515 0.2381 0.001 6iub:B, 6iuc:A, 6iuc:B, 6iuc:C, 6iuc:D, 6iud:B, 6iud:C, 6iud:D, 6iud:A, 8jmj:A, 8jmj:B, 8jmj:C, 8jmj:D, 8jmk:A, 8jmk:B, 8jmk:C, 8jmk:D, 8jml:A, 8jml:B
7 2ved:B 254 116 0.1208 0.1260 0.2759 0.002 3bfv:A, 3bfv:B, 2ved:A
8 3q9l:A 257 43 0.0717 0.0739 0.4419 0.007 3q9l:B, 3r9i:A, 3r9i:B, 3r9i:C, 3r9i:D, 3r9j:A, 3r9j:B
9 6riq:C 254 162 0.1623 0.1693 0.2654 0.011 6riq:D, 6riq:G, 6riq:J, 6riq:K, 6riq:M, 6riq:N, 6riq:Q, 6riq:R, 6riq:U, 6riq:V
10 6z0p:A 242 61 0.0717 0.0785 0.3115 0.031 6z0p:B
11 4jlv:A 228 50 0.0679 0.0789 0.3600 0.048
12 7npf:C 404 39 0.0679 0.0446 0.4615 0.066 7npe:A, 7npe:B, 7npe:C, 7npe:D, 7npf:B, 7npf:D, 7npf:F, 7npf:H, 7npf:E, 7npf:G, 7npf:A
13 6g2g:B 273 133 0.1245 0.1209 0.2481 0.080 6g2g:A
14 5if9:A 251 38 0.0604 0.0637 0.4211 0.11 5if9:B, 5ihp:A, 5ihp:B
15 3kb1:A 243 137 0.1434 0.1564 0.2774 0.23 3kb1:B, 6oby:A, 6oby:B
16 1ion:A 243 161 0.1736 0.1893 0.2857 0.32
17 8zkc:A 346 36 0.0679 0.0520 0.5000 0.57
18 1g3q:A 237 147 0.1585 0.1772 0.2857 0.59 1g3r:A
19 7dut:A 220 147 0.1283 0.1545 0.2313 1.1 7dv3:A, 7dv3:B, 7dwr:A, 7dwr:D, 7dwr:B, 7dwr:C
20 5aup:I 241 117 0.1094 0.1203 0.2479 1.1 5aun:B, 5auo:B, 5aup:B, 3vx3:A, 3vx3:B
21 5lst:A 617 45 0.0566 0.0243 0.3333 1.3
22 4rz3:A 244 39 0.0528 0.0574 0.3590 2.0 4rz3:B
23 3cwq:A 206 28 0.0528 0.0680 0.5000 2.1 3cwq:B
24 5k5z:D 314 37 0.0528 0.0446 0.3784 3.1 5k5z:A, 5u1j:B, 5u1j:A, 5u1j:C, 5u1j:D
25 6ql9:D 1765 37 0.0604 0.0091 0.4324 3.3 3hmj:A, 3hmj:B, 3hmj:C, 8prv:A, 8prv:B, 8prw:A, 8prw:B, 8prw:C, 8prw:D, 8prw:E, 8prw:F, 8ps1:A, 6ql6:F, 6ql6:E, 6ql6:D, 6ql6:C, 6ql6:B, 6ql6:A, 6ql9:F, 6ql9:A, 6ql9:E, 6ql9:B, 6ql9:C, 6ta1:A, 6ta1:B, 6ta1:D, 6ta1:K, 6ta1:F, 6ta1:I, 6u5u:A, 2vkz:A, 2vkz:B, 2vkz:C, 2wat:A, 2wat:B, 2wat:C, 2wat:D, 2wat:E, 2wat:F
26 3ez2:B 394 176 0.1660 0.1117 0.2500 3.3 3ez2:A, 3ez6:A, 3ez6:B
27 5o6m:D 264 98 0.0981 0.0985 0.2653 3.4 5lc9:B, 5lc9:C, 5lc9:D, 5lcd:A, 5lcd:B, 5lcd:C, 5lcd:D, 5ld1:A, 5ld1:D, 5ld1:B, 5ld1:C, 5ldb:A, 5ldb:B, 5ldb:C, 5ldb:D, 5maq:A, 5maq:B, 5maq:C, 5maq:D, 5o6k:A, 5o6k:B, 5o6k:C, 5o6k:D, 5o6m:A, 5o6m:B, 5o6m:C
28 6bs3:A 330 39 0.0679 0.0545 0.4615 5.8 6bs4:A, 6bs5:A
29 4gdf:A 497 49 0.0453 0.0241 0.2449 7.2 5d9i:A, 5d9i:B, 4e2i:A, 4e2i:B, 4e2i:C, 4e2i:D, 4e2i:E, 4e2i:F, 4e2i:G, 4e2i:H, 4e2i:I, 4e2i:J, 4e2i:K, 4e2i:L, 4fgn:A, 4fgn:B, 4gdf:B, 4gdf:E, 4gdf:F, 2h1l:A, 2h1l:B, 2h1l:C, 2h1l:D, 2h1l:E, 2h1l:F, 2h1l:G, 2h1l:H, 2h1l:I, 2h1l:J, 2h1l:K, 2h1l:L, 2itl:A, 2itl:B, 1n25:A, 1n25:B, 2nl8:A, 2ntc:A, 2ntc:B, 1svl:A, 1svl:B, 1svl:C, 1svm:A, 1svm:F, 1svm:B, 1svm:C, 1svm:D, 1svm:E, 1svo:A, 1svo:B
30 2afh:E 289 27 0.0528 0.0484 0.5185 7.9 2afh:F, 2afi:E, 2afi:F, 2afi:G, 2afi:H, 2afi:M, 2afi:N, 2afi:O, 2afi:P, 2c8v:A, 1de0:A, 1de0:B, 8dfc:E, 8dfc:F, 8dfd:E, 8dfd:F, 8dfd:G, 8dfd:H, 1fp6:A, 1fp6:B, 1fp6:C, 1fp6:D, 1g1m:A, 1g1m:B, 1g20:E, 1g20:F, 1g20:G, 1g20:H, 1g21:E, 1g21:F, 1g21:G, 1g21:H, 1g5p:A, 1g5p:B, 1m1y:E, 1m1y:F, 1m1y:G, 1m1y:H, 1m1y:M, 1m1y:N, 1m1y:O, 1m1y:P, 1m34:E, 1m34:F, 1m34:G, 1m34:H, 1m34:M, 1m34:N, 1m34:O, 1m34:P, 1n2c:E, 1n2c:F, 1n2c:G, 1n2c:H, 6n4j:A, 6n4j:B, 6n4k:A, 6n4k:B, 6n4l:A, 6n4m:A, 1nip:B, 1nip:A, 2nip:A, 2nip:B, 6o0b:A, 6o0b:B, 6q93:A, 6q93:B, 6q93:C, 6q93:D, 6q93:E, 6q93:F, 6q93:G, 6q93:H, 1rw4:A, 7t4h:A, 8tc3:A, 8tc3:B, 7tne:A, 7tpn:A, 7tpo:A, 7tpv:A, 7tpw:A, 7tpx:A, 7tpy:A, 7tpz:A, 7tq0:A, 7tq9:A, 7tqc:A, 7tqe:A, 7tqf:A, 7tqh:A, 7tqi:A, 7tqj:A, 7tqk:A, 7ut8:E, 7ut8:F, 7ut9:E, 7ut9:F, 7uta:E, 7uta:F, 7uta:G, 7uta:H, 4wza:E, 4wza:F, 4wza:G, 4wza:H, 4wzb:E, 4wzb:F, 4wzb:G, 4wzb:H, 1xcp:A, 1xcp:B, 1xcp:C, 1xcp:D, 1xd8:A, 1xd8:B, 1xd9:A, 1xd9:B, 1xdb:A, 1xdb:B
31 5h6o:A 281 27 0.0604 0.0569 0.5926 8.0
32 1t9b:A 583 56 0.0755 0.0343 0.3571 8.4 1t9d:B, 1t9d:C
33 2h7f:X 314 58 0.0642 0.0541 0.2931 8.5 2h7g:X, 3igc:A
34 6u9d:B 607 56 0.0755 0.0329 0.3571 8.7 6bd3:A, 6bd3:B, 6bd9:A, 6bd9:B, 5fem:A, 5fem:B, 5ims:A, 5ims:B, 1jsc:A, 1jsc:B, 1n0h:A, 1n0h:B, 1t9a:A, 1t9a:B, 1t9b:B, 1t9c:A, 1t9c:B, 1t9d:A, 1t9d:D, 6u9d:A, 6u9d:E, 6u9d:F, 6u9d:I, 6u9d:J, 6u9d:M, 6u9d:N, 6u9d:Q, 6u9d:U, 6u9d:V, 5wkc:A, 5wkc:D, 5wkc:B, 5wkc:E
35 6nop:B 262 151 0.1585 0.1603 0.2781 9.1 6non:B, 6noo:B, 6nop:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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