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BioLiP
>protein
ETRPNHTIYINNLNSKIKKDELKKSLHAIFSRFGQILDILVPRQRTPRGQAFVIFKEVSSATNALRSMQGFPFYDKPMAI
QYAKTDKRIPA

The query sequence (length=91) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6xh2:A 93 90 0.9780 0.9570 0.9889 8.18e-63 6cmn:A, 3k0j:D, 3k0j:C, 6xh0:A, 6xh1:A, 6xh3:A
2 4pkd:B 240 90 0.8571 0.3250 0.8667 2.81e-50 1aud:A, 7b0y:c, 3bo2:A, 3bo3:A, 3bo4:A, 4c4w:A, 4c4w:E, 3cul:A, 3cul:B, 3cun:A, 3cun:B, 7d7v:C, 5ddo:G, 5ddo:C, 5ddp:D, 5ddp:C, 5ddq:D, 5ddq:C, 5ddr:D, 5ddr:C, 7dlz:A, 7dlz:B, 1drz:A, 7dwh:A, 7dwh:B, 1dz5:A, 1dz5:B, 3egz:A, 5fj4:A, 5fj4:E, 3g8s:A, 3g8s:B, 3g8s:C, 3g8s:D, 3g8t:A, 3g8t:B, 3g8t:C, 3g8t:D, 3g96:A, 3g96:B, 3g96:C, 3g96:D, 3g9c:A, 3g9c:B, 3g9c:C, 3g9c:D, 8gxb:C, 8gxb:D, 8gxb:F, 8gxc:C, 8gxc:D, 8gxc:F, 3hhn:B, 3hhn:D, 3iin:A, 3irw:P, 3iwn:C, 3iwn:D, 8jy0:A, 8jy0:C, 8jy0:E, 3k0j:A, 3k0j:B, 3l3c:A, 3l3c:B, 3l3c:C, 3l3c:D, 6las:E, 6las:D, 6las:C, 6lau:E, 6lau:D, 6lau:C, 6lax:D, 6lax:E, 6lax:C, 6laz:D, 6laz:E, 6laz:C, 1m5k:C, 1m5k:F, 1m5o:C, 1m5o:F, 1m5p:C, 1m5p:F, 1m5v:C, 1m5v:F, 3mum:P, 3mur:P, 3mut:P, 3muv:P, 3mxh:P, 2nz4:A, 2nz4:B, 2nz4:C, 2nz4:D, 2oih:A, 2oj3:A, 3p49:B, 4pr6:A, 4prf:A, 7qr3:A, 7qr3:B, 7qr4:A, 6qx9:1A, 3r1h:A, 3r1h:D, 3r1l:A, 3r1l:D, 1sj3:P, 1sj4:P, 1sjf:A, 6sqn:A, 6sqn:B, 6sqn:C, 6sqq:AAA, 6sqq:BBB, 6sqq:CCC, 1u6b:A, 3ucu:P, 3ucz:P, 3ud3:P, 3ud4:P, 1urn:A, 1urn:B, 1urn:C, 1vbx:A, 1vby:A, 1vbz:A, 1vc0:A, 1vc5:A, 1vc6:A, 7vpx:M, 4w90:B, 4w92:B, 1zzn:A
3 7abg:B 169 87 0.6593 0.3550 0.6897 8.49e-41 7a5p:X, 1a9n:B, 1a9n:D, 7abi:B, 6ah0:p, 6ahd:p, 8c6j:Y, 8ch6:s, 7evo:G, 9fmd:p, 8h6e:2C, 8h6j:2C, 8h6k:2C, 8h6l:2C, 8hk1:G, 8i0p:p, 8i0r:p, 8i0s:p, 8i0t:p, 8i0u:p, 8i0v:p, 8i0w:p, 6icz:p, 6id0:p, 6id1:p, 5mqf:X, 6qdv:Y, 8qo9:2B, 6qx9:2B, 8qxd:2B, 8qzs:2B, 8r08:2B, 8r09:2B, 8r0a:2B, 8r0b:2B, 8rm5:2B, 7vpx:G, 7w59:p, 7w5a:p, 7w5b:p, 5xjc:p, 6y53:b, 6y5q:b, 5yzg:p, 5z56:p, 5z57:p, 5z58:p
4 6f4h:C 96 91 0.7143 0.6771 0.7143 4.37e-37 6f4g:B, 6f4g:E, 6f4h:A, 6f4h:E
5 8ro1:p 76 76 0.5385 0.6447 0.6447 2.54e-35
6 3jb9:k 89 83 0.3736 0.3820 0.4096 3.07e-20
7 7b9v:Y 88 87 0.2857 0.2955 0.2989 6.96e-13 6bk8:r, 7dco:p, 6exn:Y, 6g90:Y, 5gmk:a, 6j6g:a, 6j6h:a, 6j6n:a, 6j6q:a, 5lj3:Y, 5lj5:Y, 5mq0:Y, 5nrl:Y, 7oqb:Y, 7oqe:Y, 5wsg:X, 5y88:p, 5ylz:p, 5zwm:p, 5zwo:p
8 2mb0:B 95 84 0.2857 0.2737 0.3095 2.24e-08
9 3lqv:B 115 83 0.2637 0.2087 0.2892 8.13e-08 2f9j:B, 3lqv:A, 7q4o:F, 8qo9:B6, 8qxd:B6, 8qzs:B6, 8r08:B6, 8r09:B6, 8r0a:B6, 8r0b:B6, 8rm5:B6
10 2fy1:A 108 79 0.2747 0.2315 0.3165 3.19e-07
11 2leb:A 101 81 0.2418 0.2178 0.2716 4.02e-07 2lec:A
12 7s7b:C 79 80 0.2308 0.2658 0.2625 6.72e-06 7s7b:G, 7s7c:C
13 7q33:A 93 84 0.2857 0.2796 0.3095 2.80e-05 6pai:D, 6q0r:D, 6q0v:D, 6q0w:D, 6sj7:C, 6ud7:C, 6ue5:C
14 2i2y:A 150 81 0.2418 0.1467 0.2716 1.39e-04 9asq:H, 5bmg:A, 5bmg:B, 5bmg:H, 5bmg:D, 5bmg:E, 5bmg:F, 5bmg:G, 5bmh:A, 3v3x:C, 3v3x:D
15 7zew:A 117 81 0.2637 0.2051 0.2963 1.40e-04 7zex:A
16 8i0v:4 161 80 0.2637 0.1491 0.3000 1.42e-04
17 6hpj:B 84 66 0.2198 0.2381 0.3030 2.56e-04
18 8xxm:3G 84 83 0.2418 0.2619 0.2651 3.52e-04 5k0y:O, 8pj1:o, 8pj2:o, 8pj3:o, 8pj4:o, 8pj5:o, 8pj6:o
19 7qde:B 169 65 0.2198 0.1183 0.3077 5.87e-04 7qdd:B
20 8y6o:W 167 71 0.2418 0.1317 0.3099 7.78e-04
21 2mkc:A 118 85 0.2198 0.1695 0.2353 0.001 2my3:A
22 4ed5:B 169 66 0.2418 0.1302 0.3333 0.001 4ed5:A
23 7dco:X 128 86 0.2198 0.1562 0.2326 0.001 5gm6:V, 5zwm:X
24 5mqf:o 223 82 0.2527 0.1031 0.2805 0.002 6id1:y, 7w59:y, 7w5a:y, 7w5b:y
25 4a8x:A 88 67 0.2308 0.2386 0.3134 0.002
26 6dg0:B 84 80 0.2527 0.2738 0.2875 0.002 6dg0:A
27 2yka:A 124 76 0.2198 0.1613 0.2632 0.005
28 2rra:A 99 66 0.1978 0.1818 0.2727 0.006 2kxn:B
29 2n7c:A 89 74 0.1868 0.1910 0.2297 0.007
30 4lmz:A 176 81 0.2418 0.1250 0.2716 0.007 3nmr:A, 3nna:A, 3nnc:A, 3nnh:A, 3nnh:C, 3nnh:B, 3nnh:D
31 2n82:B 104 46 0.1648 0.1442 0.3261 0.012 2err:A, 7vrl:B
32 7csz:A 175 48 0.2198 0.1143 0.4167 0.012
33 6g90:B 193 71 0.2308 0.1088 0.2958 0.015
34 8xxn:3B 536 53 0.1648 0.0280 0.2830 0.016 6zon:B, 6zp4:B, 6zvj:B
35 8h6e:4R 106 77 0.2418 0.2075 0.2857 0.017 8h6j:4R, 8qp8:R, 8qp9:R, 8qpk:R, 6qw6:R, 6qx9:R, 8qxd:R, 8r08:R, 8r0a:R
36 8pj1:1 588 53 0.1648 0.0255 0.2830 0.018 6fec:w, 2krb:A, 8oz0:I, 8pj2:1, 8pj3:1, 8pj5:1, 8pj6:1
37 6n7p:A 186 71 0.2308 0.1129 0.2958 0.024 6n7r:A, 6n7x:A, 7oqc:B, 7oqe:B, 8w2o:A, 5zwn:Q
38 2mgz:B 105 46 0.1868 0.1619 0.3696 0.034 4ch1:A, 4cio:A, 2ru3:A
39 4f02:A 175 83 0.2747 0.1429 0.3012 0.038 1cvj:A, 1cvj:B, 1cvj:C, 1cvj:D, 1cvj:E, 1cvj:F, 1cvj:G, 1cvj:H, 4f02:D
40 1fje:B 175 81 0.2527 0.1314 0.2840 0.056 1rkj:A
41 7evo:D 200 88 0.2418 0.1100 0.2500 0.058 8hk1:D, 6n3e:A, 6n3f:C, 6nsx:A
42 2mxy:A 105 79 0.2527 0.2190 0.2911 0.062 2mz1:A
43 4bs2:A 174 51 0.1538 0.0805 0.2745 0.13 4iuf:A, 4y00:A, 4y00:B, 4y00:C, 4y00:D, 4y0f:A, 4y0f:B
44 2adb:A 127 56 0.1868 0.1339 0.3036 0.36 3zzy:A, 3zzy:B, 3zzz:A, 3zzz:B
45 8esq:o 137 68 0.1758 0.1168 0.2353 0.44 8esr:o, 8etg:o, 8eth:o, 8eti:o, 8eup:o, 8euy:o, 8ev3:o
46 3d2w:A 72 43 0.1209 0.1528 0.2558 0.81
47 2mki:A 203 64 0.1978 0.0887 0.2812 1.0
48 4qqb:A 169 69 0.1868 0.1006 0.2464 2.5 1b7f:A, 1b7f:B, 4qqb:B
49 3cei:A 213 29 0.1429 0.0610 0.4483 2.6 3cei:B
50 7z8f:e 4579 39 0.1429 0.0028 0.3333 3.0 5owo:A, 8pr2:f, 8ptk:m, 8ptk:n, 7z8f:f, 7z8f:m, 7z8f:n, 7z8h:A
51 8ptk:f 4502 39 0.1429 0.0029 0.3333 3.1 8ptk:e
52 4uer:b 572 50 0.1429 0.0227 0.2600 3.4
53 6gsn:p 658 50 0.1429 0.0198 0.2600 4.0 8cah:p, 8cas:p, 6fyx:p, 6fyy:p, 6gsm:p, 6zce:p, 6zu9:p
54 3d34:B 215 22 0.0989 0.0419 0.4091 5.1 3d34:A
55 3s1s:A 870 52 0.1648 0.0172 0.2885 5.2
56 7vki:A 113 31 0.1648 0.1327 0.4839 5.5
57 1r8d:A 109 38 0.1209 0.1009 0.2895 5.7 1r8d:B
58 1bg0:A 356 45 0.1648 0.0421 0.3333 5.8 4gvy:A, 4gvz:A, 4gw0:A, 4gw2:A, 5j99:A, 5j9a:A, 1m15:A, 1p50:A, 1p52:A, 1rl9:A, 1sd0:A
59 3hzt:A 421 34 0.1429 0.0309 0.3824 7.3
60 1u08:A 382 45 0.1538 0.0366 0.3111 7.6 1u08:B
61 3m1c:A 719 42 0.1648 0.0209 0.3571 8.3
62 4dtf:A 356 50 0.1758 0.0449 0.3200 9.9 4dth:A, 4dtl:A, 4e1c:A, 4e1d:A, 4e1f:A, 4gqk:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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