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BioLiP
>protein
ESVVDLRGMWIGLVLLNVFYLIVRIYEQVFGWRAGLDSFAPEFQTYWMSILWTEIPLELVSGLGLAGYLWKTRDRNVDAV
TPREEMRRLVVLVQWLVVYGIAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSVIAVGAFFYAKTRIPYF
AHGYSLAFLIVAIGPFMIIPNVWMALGVFGVVLQILMRIHALVGKEGVKLLTE

The query sequence (length=213) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4pi0:C 217 217 1.0000 0.9816 0.9816 9.08e-153 4phz:C, 4phz:G, 4phz:K, 4pi0:G, 4pi0:K, 3rfr:C, 3rfr:G, 3rfr:K
2 7s4m:K 241 241 1.0000 0.8838 0.8838 5.20e-148 4pi2:C, 4pi2:G, 4pi2:K, 7s4m:G, 7s4m:C
3 3chx:C 159 159 0.6573 0.8805 0.8805 6.66e-105 3chx:G, 3chx:K
4 3rgb:C 213 192 0.5634 0.5634 0.6250 9.80e-85 3rgb:K, 3rgb:G
5 8oyi:C 236 180 0.5399 0.4873 0.6389 3.02e-82 8oyi:G, 8oyi:K, 7s4h:C, 7s4h:G, 7s4h:K, 7s4i:C, 7s4i:G, 7s4i:K, 7s4j:C, 7s4j:G, 7s4j:K, 7s4k:C, 7s4k:G, 7s4k:K, 8sqw:C, 8sqw:G, 8sqw:K, 8sr1:C, 8sr1:G, 8sr1:K, 8sr2:C, 8sr2:G, 8sr2:K, 8sr4:C, 8sr4:G, 8sr4:K, 7t4p:C, 7t4p:G, 7t4p:K
6 7s4l:C 231 223 0.5446 0.5022 0.5202 1.53e-74 7s4l:H, 7s4l:I
7 1yew:C 188 187 0.5211 0.5904 0.5936 3.47e-74 1yew:G, 1yew:K
8 6cxh:C 101 133 0.2207 0.4653 0.3534 2.95e-15
9 2zx6:A 442 123 0.1315 0.0633 0.2276 0.25 1hl9:A, 1hl9:B, 1odu:A, 1odu:B, 2wsp:A, 2wsp:B, 2zwz:A, 2zwz:B, 2zx5:A, 2zx5:B, 2zx6:B, 2zx7:A, 2zx7:B, 2zx8:A, 2zx8:B, 2zx9:A, 2zx9:B, 2zxa:A, 2zxa:B, 2zxb:A, 2zxb:B, 2zxd:A, 2zxd:B
10 7kgg:C 1020 58 0.0939 0.0196 0.3448 0.44 7kgh:C, 7kgi:A, 7kgi:C
11 8wst:R 287 113 0.1268 0.0941 0.2389 1.3
12 7wf3:C 328 62 0.0892 0.0579 0.3065 1.6 2a79:A, 3eau:A, 3eb3:A, 3eb4:A, 6ebk:A, 6ebk:C, 6ebk:E, 6ebk:G, 6ebl:A, 6ebl:C, 6ebl:E, 6ebl:G, 7ej1:A, 7ej1:C, 7ej1:E, 7ej1:G, 7ej2:A, 7ej2:C, 7ej2:E, 7ej2:G, 1exb:A, 4jta:A, 4jta:P, 4jtc:A, 4jtc:G, 4jtd:A, 4jtd:G, 3lnm:A, 3lnm:C, 3lut:A, 1qrq:A, 1qrq:B, 1qrq:C, 1qrq:D, 2r9r:A, 2r9r:G, 7sit:A, 7sit:C, 7siz:A, 7siz:C, 7wf3:G, 7wf3:I, 7wf3:M, 7wf4:G, 7wf4:I, 7wf4:M, 7wf4:o, 5wie:A, 5wie:G, 1zsx:A
13 7sk7:A 267 130 0.1502 0.1199 0.2462 4.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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