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BioLiP
>protein
EPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGE

The query sequence (length=51) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2qic:A 51 51 1.0000 1.0000 1.0000 3.53e-34
2 1wes:A 71 51 0.8824 0.6338 0.8824 4.26e-31 2g6q:A
3 1weu:A 91 51 0.7647 0.4286 0.7647 3.01e-26 3c6w:A, 3c6w:C, 2k1j:A, 2m1r:A, 2pnx:A, 2pnx:C, 2vnf:A, 2vnf:C, 1wen:A
4 1x4i:A 70 45 0.6863 0.5000 0.7778 7.49e-25 7zmx:A, 7zmx:B
5 2jmi:A 60 47 0.5882 0.5000 0.6383 4.70e-19 2jmj:A
6 2mum:A 50 48 0.5294 0.5400 0.5625 5.99e-17
7 6j2p:A 98 54 0.4118 0.2143 0.3889 1.89e-05 6j2p:B, 6j2p:D, 6j2p:C
8 4gnd:C 107 34 0.2941 0.1402 0.4412 1.73e-04 4gnd:A, 4gne:A, 4gnf:A, 4gng:A, 4gng:D
9 2k16:A 75 48 0.3725 0.2533 0.3958 4.64e-04 5c13:A, 5c13:C, 5c13:E, 5c13:G, 2k17:A, 5wxg:A, 5wxh:C, 5wxh:A, 5xmy:A, 5xmy:C
10 9c0o:A 63 55 0.3725 0.3016 0.3455 6.89e-04
11 2naa:A 94 34 0.2549 0.1383 0.3824 0.002
12 2l5u:A 61 41 0.3333 0.2787 0.4146 0.038
13 7mju:A 184 37 0.2353 0.0652 0.3243 0.072 5dag:A, 5dah:B, 5dah:A
14 5b73:A 313 21 0.1765 0.0288 0.4286 0.073 4cos:A, 7cwh:B, 5y1z:C, 5y1z:D
15 2puy:B 60 41 0.2549 0.2167 0.3171 0.10 2puy:A
16 3kv4:A 432 53 0.3922 0.0463 0.3774 0.14 4do0:A, 3k3n:A, 3k3o:A, 2wwu:A
17 8i3x:A 60 47 0.3137 0.2667 0.3404 0.16 8i3x:B
18 2yql:A 56 41 0.2549 0.2321 0.3171 0.20
19 8w9c:F 156 47 0.3725 0.1218 0.4043 0.26 8hxx:P, 8hy0:P, 8jho:P, 8w9d:F, 8w9e:F, 8w9f:F
20 1wep:A 79 52 0.3529 0.2278 0.3462 0.27
21 7yi0:F 120 47 0.3725 0.1583 0.4043 0.28
22 2rsd:A 68 54 0.3137 0.2353 0.2963 0.33
23 5wlf:A 60 53 0.4118 0.3500 0.3962 0.38 5wle:A
24 8ihn:M 357 33 0.2745 0.0392 0.4242 0.38 8kd4:E
25 7yi2:D 321 33 0.2745 0.0436 0.4242 0.40 7yi0:D, 7yi3:D, 7yi4:D, 7yi5:D
26 8hxx:N 375 47 0.3725 0.0507 0.4043 0.41 8hxy:N, 8hy0:N, 8i3f:B, 8jho:N, 8tof:G, 8w9c:E, 8w9d:E, 8w9e:E, 8w9f:E
27 6ieu:A 170 40 0.3333 0.1000 0.4250 0.43 6iet:A
28 1wem:A 76 54 0.3922 0.2632 0.3704 0.46 4l7x:A, 2m3h:A
29 8kd6:E 301 47 0.3725 0.0631 0.4043 0.49 8kd2:E
30 1mm3:A 61 38 0.2941 0.2459 0.3947 0.61
31 1tz3:A 299 14 0.1569 0.0268 0.5714 0.79 1tz6:A, 1tz6:B
32 5o3w:B 717 22 0.1961 0.0139 0.4545 0.92 5o3u:A, 5o3u:B, 5o3u:C, 5o3u:D, 5o3v:B, 5o3v:A, 5o3w:A, 5o3w:C, 5o3w:D, 5uw3:A, 5uw3:B, 5uw3:C, 5uw5:A, 5uw5:B, 5uw5:C, 5uw6:A, 5uw6:B, 5uw6:C, 5uzw:A, 5uzw:B, 5uzw:C
33 5uw3:D 698 22 0.1961 0.0143 0.4545 0.93 5uw5:D, 5uw6:D, 5uw7:A, 5uw7:B, 5uzw:D
34 3n9m:A 503 36 0.2941 0.0298 0.4167 0.99 3n9l:A, 3n9m:C, 3n9n:A, 3n9o:A, 3n9p:A, 3n9q:A, 3puq:A, 3puq:C, 3pur:A, 3pur:C
35 6ryr:W 708 38 0.2941 0.0212 0.3947 1.1 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
36 2mny:A 55 17 0.1765 0.1636 0.5294 1.2 2mnz:A
37 6q3m:C 219 38 0.2941 0.0685 0.3947 1.3 6q3m:A, 6q3m:B
38 8f8y:B 433 53 0.3922 0.0462 0.3774 1.3 8f8y:A, 8f8z:A, 8f8z:B, 3kqi:A, 7m10:A, 3pu3:A, 3pu3:B, 3pu8:B, 3pu8:A, 3pua:A, 3pus:A, 3pus:B
39 3o36:A 184 40 0.3137 0.0870 0.4000 1.4 7b9x:A, 5h1t:A, 5h1t:B, 5h1t:C, 5h1t:D, 5h1u:B, 5h1u:A, 5h1u:C, 5h1u:D, 5h1v:A, 5h1v:B, 3o33:A, 3o33:B, 3o33:C, 3o33:D, 3o34:A, 3o35:B, 3o35:A, 3o36:B, 3o37:A, 3o37:B, 3o37:C, 3o37:D, 4yab:A, 4yab:B, 4yad:A, 4yad:B, 4yat:A, 4yat:B, 4yax:A, 4yax:B, 4ybm:A, 4ybm:B, 4ybs:A, 4ybt:A, 4yc9:A, 4zql:A, 4zql:B
40 6guu:B 204 38 0.2941 0.0735 0.3947 1.6 6guu:A
41 7klo:A 59 17 0.1961 0.1695 0.5882 1.7 7klr:A
42 2miq:A 94 37 0.2745 0.1489 0.3784 1.9
43 7ebk:A 183 43 0.3137 0.0874 0.3721 2.4 7ebj:A
44 8bpb:C 126 37 0.2745 0.1111 0.3784 2.6 8bpc:C
45 4qiw:B 1069 24 0.2157 0.0103 0.4583 2.7 4qiw:J
46 6kf3:B 1114 24 0.2157 0.0099 0.4583 2.7 9bct:B, 9bcu:B, 6kf4:B, 6kf9:B
47 8bpa:C 213 37 0.2745 0.0657 0.3784 2.8 8c60:C
48 7xga:A 126 34 0.2549 0.1032 0.3824 2.9 6vfo:A
49 1f62:A 51 31 0.2549 0.2549 0.4194 3.8
50 4gy5:A 215 32 0.2745 0.0651 0.4375 4.2 3ask:A, 3ask:B, 3ask:D, 3asl:A, 3db3:A, 7fb7:B, 4gy5:B, 6iiw:A, 2lgg:A, 2lgk:A, 2lgl:A, 4qqd:A, 4qqd:B, 3shb:A, 3sou:A, 3sou:B, 3sow:A, 3sow:B, 3sox:A, 3sox:B, 3t6r:B, 3t6r:A, 8wms:A, 5xpi:A, 5yy9:A, 5yy9:B, 3zvy:A, 3zvy:B, 3zvz:B
51 5vab:A 54 23 0.1961 0.1852 0.4348 5.0
52 8a5a:U 690 20 0.1961 0.0145 0.5000 5.2 8a5o:U, 4am7:A, 4am7:B
53 3kv6:D 448 49 0.3137 0.0357 0.3265 5.3 3kv5:D, 3kv5:A, 3kv6:A, 3kv9:A, 3kva:A, 3u78:A
54 8ge0:A 188 35 0.2745 0.0745 0.4000 5.4 8gdx:A, 8ge0:B, 8ge0:C
55 6u04:A 168 44 0.2549 0.0774 0.2955 5.4 5erc:A
56 2hay:D 222 32 0.2549 0.0586 0.4062 5.8 2hay:A, 2hay:B, 2hay:C
57 2e6r:A 92 34 0.2549 0.1413 0.3824 6.0
58 4wlc:A 536 17 0.1765 0.0168 0.5294 6.1 4xb3:A, 2zic:A, 2zid:A
59 8dmu:A 476 11 0.1373 0.0147 0.6364 7.2 8dmu:B, 8dmu:C, 8dmu:D
60 7s14:B 223 25 0.1961 0.0448 0.4000 7.5 7ldq:A, 7rzl:A, 7rzl:B, 7rzp:A, 7rzp:B, 7s14:A, 7s14:C, 7s14:D, 7s1a:A, 7s1a:B, 7t2z:A, 7t2z:B, 7t33:A, 7t33:B
61 6sum:A 335 16 0.1569 0.0239 0.5000 7.6 6sum:B, 6sun:A
62 6oie:B 111 37 0.2745 0.1261 0.3784 7.7 6oie:A, 5u2j:B, 5u2j:A
63 2l43:A 80 21 0.1569 0.1000 0.3810 8.9 2ku3:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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