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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
ENETKRELVFKEEGMEYAQVIKMLGNGRLEVFCFDGKRRIGHICGRLKKKVWISMDDIVLVGLRDFQDDKCDILLKYLPD
EVRNLKQYGEIDENIKIND

The query sequence (length=99) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 4bts:A0 99 99 1.0000 1.0000 1.0000 5.44e-68 4bts:B0, 4bts:C0, 4bts:D0
2 1d7q:A 143 100 0.6869 0.4755 0.6800 2.33e-44 7a09:G, 4kzy:n, 4kzz:n, 8oz0:G, 8p03:j, 8p09:j, 8pj1:q, 8pj2:q, 8pj3:q, 8pj4:q, 8pj5:q, 8pj6:q, 8ppl:Iq, 7qp6:q, 7qp7:q, 7syq:A, 7syr:A, 7sys:A, 7syv:A, 7syw:A, 7syx:A, 7tql:4, 6yal:j, 6yam:j, 6ybw:q, 6zmw:q, 6zp4:G
3 6fyx:i 121 96 0.6061 0.4959 0.6250 2.03e-41 8cah:i, 8cas:A, 6fyy:i, 6gsm:i, 6gsn:i, 3j80:i, 3j81:i, 3jam:i, 3jap:i, 8rw1:i, 8s8d:i, 8s8e:i, 8s8f:i, 8s8g:i, 8s8h:i, 8s8i:i, 8s8j:i, 4uer:0, 6zce:i, 6zu9:A
4 7ase:w 147 84 0.4141 0.2789 0.4881 3.95e-18
5 5jb3:6 95 78 0.2929 0.3053 0.3718 1.85e-08 5jbh:6, 6sw9:6, 6swc:6, 6swd:6, 7zag:6, 7zah:6, 7zai:6
6 6zxg:j 116 96 0.2525 0.2155 0.2604 0.010 6zxf:j, 6zxh:j
7 8jze:K 177 41 0.1515 0.0847 0.3659 3.7 8jw0:K, 8jzf:K
8 8rdw:H 386 56 0.1717 0.0440 0.3036 3.8 8rd8:H
9 6zck:C 238 22 0.0909 0.0378 0.4091 3.9
10 7acp:A 137 29 0.1414 0.1022 0.4828 4.5 7acp:B, 7adf:A, 7adf:B, 7adq:A, 7adq:B, 7adx:A, 7adx:B, 5chq:A, 5chq:B, 5chr:A, 5chr:B, 6ch5:A, 6ch5:B, 6ch6:A, 6ch6:B, 6cke:A, 6cke:B, 6co5:A, 6co5:B, 6cre:A, 6cre:B, 8dog:A, 8dog:B, 8doh:A, 8doh:B, 8doi:A, 8doi:B, 8doj:A, 8doj:B, 3dr9:A, 3dr9:B, 4dwt:A, 4dwt:B, 4dwu:A, 4dwu:B, 8ejn:A, 8ejn:B, 1ew6:A, 1ew6:B, 1ewa:A, 1ewa:B, 4fh6:A, 4fh6:B, 4fh7:A, 4fh7:B, 4gzg:A, 4gzg:B, 4hsw:A, 4hsw:B, 4hsx:A, 4hsx:B, 6i6g:A, 6i6g:B, 6i7f:A, 6i7f:B, 4ilz:A, 4ilz:B, 3ixf:A, 3ixf:B, 4jac:A, 4jac:B, 7jor:A, 7jor:B, 4jyq:A, 4jyq:B, 5k1l:A, 5k1l:B, 3k3u:A, 3k3u:B, 7kcu:A, 7kcu:B, 7kfm:A, 7kfm:B, 4kjt:A, 4kjt:B, 4kmv:A, 4kmv:B, 4kmw:A, 4kmw:B, 4kn3:A, 4kn3:B, 3kun:A, 3kun:B, 3kuo:A, 3kuo:B, 3lb1:A, 3lb1:B, 3lb2:A, 3lb2:B, 3lb3:A, 3lb3:B, 3lb4:A, 3lb4:B, 5lk9:A, 5lk9:B, 5lkv:A, 5lkv:B, 5llz:A, 5llz:B, 7lzk:A, 7lzk:B, 7lzn:A, 7lzn:B, 7lzo:A, 7lzo:B, 7m0f:A, 7m0f:B, 7m0h:A, 7m0h:B, 7m1i:A, 7m1i:B, 7m1j:A, 7m1j:B, 7m1k:A, 7m1k:B, 7mnh:A, 7mnh:B, 3mou:A, 3mou:B, 3mym:A, 3mym:B, 3myn:A, 3myn:B, 3o7n:A, 3o7n:B, 3oj1:A, 3oj1:B, 3ok5:A, 3ok5:B, 6ong:A, 6ong:B, 6onk:A, 6onk:B, 6onr:A, 6onr:B, 6onx:A, 6onx:B, 6onz:A, 6onz:B, 6oo1:A, 6oo1:B, 6oo6:A, 6oo6:B, 6oo8:A, 6oo8:B, 3ord:A, 3ord:B, 2qfk:A, 2qfk:B, 2qfn:A, 2qfn:B, 7sjb:A, 7sjb:B, 7sjc:A, 7sjc:B, 7sjd:A, 7sjd:B, 7sje:A, 7sje:B, 7sjf:A, 7sjf:B, 7sjg:A, 7sjg:B, 7sjh:A, 7sjh:B, 7sji:A, 7sji:B, 7t9c:A, 7t9c:B, 7t9d:A, 7t9d:B, 7t9e:AAA, 7t9e:BBB, 5v5j:A, 5v5j:B, 5v5q:A, 5v5q:B, 5v5r:B, 5v5r:A, 6vd3:A, 6vd3:B, 6vd4:A, 6vd4:B, 6vd5:A, 6vd5:B, 6vd6:A, 6vd6:B, 6vdr:A, 6vdr:B, 6vds:A, 6vds:B, 6vdt:A, 6vdt:B, 6vdu:A, 6vdu:B, 6vdv:A, 6vdv:B, 6vdw:A, 6vdw:B, 6vdx:A, 6vdx:B, 6vdy:A, 6vdy:B, 8vkc:AAA, 8vkc:BBB, 8vkd:AAA, 8vkd:BBB, 5vlx:A, 5vlx:B, 8vsk:AAA, 8vsk:BBB, 5vts:A, 5vts:B, 5vtt:A, 5vtt:B, 8vzr:A, 8vzr:B
11 8ayz:C 235 21 0.1010 0.0426 0.4762 4.9 1eah:3
12 4cja:A 753 20 0.0909 0.0120 0.4500 7.6
13 5zod:A 260 63 0.1919 0.0731 0.3016 7.9
14 5zog:A 316 37 0.1616 0.0506 0.4324 8.9 1ul1:X, 5zoe:A, 5zof:A
15 1nui:A 242 43 0.1212 0.0496 0.2791 9.6 1nui:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417