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BioLiP
>protein
EISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE

The query sequence (length=80) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1bdo:A 80 80 1.0000 1.0000 1.0000 1.04e-54 2bdo:A
2 2ejf:C 69 73 0.3500 0.4058 0.3836 1.41e-11
3 5ks8:C 603 54 0.3375 0.0448 0.5000 1.08e-09
4 5ks8:F 482 54 0.3375 0.0560 0.5000 1.23e-09
5 5ks8:D 580 54 0.3375 0.0466 0.5000 1.25e-09
6 8j78:I 651 72 0.3375 0.0415 0.3750 3.39e-08 8j78:C, 8j7d:D, 8j7d:F, 8j7d:I, 8j7d:L, 8jaw:A, 8jaw:C, 8jaw:E, 8jaw:F, 8jaw:H, 8jaw:K, 8k2v:A, 8k2v:B, 8k2v:C, 8k2v:D, 8k2v:E, 8k2v:F
7 8jxn:J 541 72 0.3375 0.0499 0.3750 3.70e-08
8 3n6r:G 646 57 0.2875 0.0356 0.4035 4.36e-07 3n6r:I, 3n6r:K
9 3n6r:A 591 57 0.2875 0.0389 0.4035 4.51e-07 3n6r:C, 3n6r:E
10 7ybu:A 670 80 0.3375 0.0403 0.3375 4.96e-07 7ybu:B, 7ybu:D, 7ybu:F, 7ybu:H, 7ybu:J
11 8sgx:X 657 65 0.3500 0.0426 0.4308 4.31e-06 8sgx:S, 8sgx:Z, 8sgx:V, 8sgy:V, 8sgy:B, 8sgy:S, 8sgy:Z, 8sgy:Y, 8sgz:V, 8sgz:Z, 8sgz:X, 8sgz:S, 8sgz:B, 8sgz:Y
12 8pn8:G 213 44 0.2375 0.0892 0.4318 3.18e-05 8pn7:G, 8pn7:H, 8pn7:I, 8pn7:J, 8pn7:K, 8pn7:L, 8pn8:H, 8pn8:I, 8pn8:J, 8pn8:K, 8pn8:L, 6ybq:G, 6ybq:H, 6ybq:I, 6ybq:J, 6ybq:K, 6ybq:L
13 8pn8:G 213 74 0.2625 0.0986 0.2838 0.009 8pn7:G, 8pn7:H, 8pn7:I, 8pn7:J, 8pn7:K, 8pn7:L, 8pn8:H, 8pn8:I, 8pn8:J, 8pn8:K, 8pn8:L, 6ybq:G, 6ybq:H, 6ybq:I, 6ybq:J, 6ybq:K, 6ybq:L
14 3va7:A 1130 74 0.3250 0.0230 0.3514 8.95e-04
15 4qsh:C 1081 51 0.2500 0.0185 0.3922 0.001 4qsh:A, 4qsh:D, 4qsh:B, 4qsk:A, 4qsk:B
16 3bg5:A 1137 54 0.2375 0.0167 0.3519 0.002 3bg5:C, 8gk8:A, 8gk8:B, 3hb9:A, 3hb9:C, 3hbl:A, 3hbl:C, 4hnt:A, 4hnt:C, 4hnu:A, 4hnu:C, 4hnv:A, 4hnv:C
17 3bg5:B 1074 54 0.2375 0.0177 0.3519 0.003 3bg5:D, 8gk8:C, 3hb9:B, 3hb9:D, 3hbl:B, 3hbl:D, 4hnt:B, 4hnt:D, 4hnu:B, 4hnu:D, 4hnv:D, 3ho8:A, 3ho8:C, 3ho8:B
18 4hnv:B 1033 54 0.2375 0.0184 0.3519 0.003 8gk8:D
19 8hwl:A 941 51 0.2250 0.0191 0.3529 0.006 8hwl:B, 8hwl:C, 8hwl:E
20 7wtb:B 1147 51 0.2250 0.0157 0.3529 0.006 3bg3:A, 3bg3:B, 3bg3:C, 3bg3:D, 3bg9:A, 3bg9:B, 3bg9:C, 3bg9:D, 8j7o:A, 8j7o:B, 8j7o:C, 8j7o:E, 7wta:C, 7wta:B, 7wta:D, 7wta:A, 7wtb:C, 7wtb:A, 7wtb:D, 7wtc:C, 7wtc:A, 7wtc:B, 7wtc:D, 7wtd:C, 7wtd:D, 7wte:C, 7wte:D
21 5vyz:A 1144 54 0.2250 0.0157 0.3333 0.014 5vyw:D, 5vyz:B, 5vyz:D, 5vz0:A, 5vz0:B, 5vz0:D, 7zyy:A, 7zyy:C, 7zyy:B, 7zyy:D, 7zyz:A, 7zz0:A, 7zz1:A, 7zz2:A, 7zz3:A, 7zz3:C, 7zz3:B, 7zz3:D, 7zz4:A, 7zz5:A, 7zz6:D, 7zz6:A, 7zz8:A, 7zz8:C, 7zz8:D, 7zz8:B
22 5vyz:A 1144 32 0.1750 0.0122 0.4375 6.1 5vyw:D, 5vyz:B, 5vyz:D, 5vz0:A, 5vz0:B, 5vz0:D, 7zyy:A, 7zyy:C, 7zyy:B, 7zyy:D, 7zyz:A, 7zz0:A, 7zz1:A, 7zz2:A, 7zz3:A, 7zz3:C, 7zz3:B, 7zz3:D, 7zz4:A, 7zz5:A, 7zz6:D, 7zz6:A, 7zz8:A, 7zz8:C, 7zz8:D, 7zz8:B
23 5vyz:C 1083 54 0.2250 0.0166 0.3333 0.015 5vyw:A, 5vyw:B, 5vyw:C, 5vz0:C
24 5vyz:C 1083 32 0.1750 0.0129 0.4375 6.6 5vyw:A, 5vyw:B, 5vyw:C, 5vz0:C
25 2b8g:A 72 57 0.2250 0.2500 0.3158 0.027 1z6h:A
26 3tw6:B 1129 38 0.2000 0.0142 0.4211 0.13 4jx4:A, 4jx4:B, 4jx4:C, 4jx4:D, 4jx5:A, 4jx5:B, 4jx5:C, 4jx5:D, 4jx6:A, 4jx6:B, 4jx6:C, 4jx6:D, 4loc:A, 4loc:B, 4loc:C, 4loc:D, 4m6v:A, 4m6v:B, 4m6v:C, 4m6v:D, 4mfd:A, 4mfd:B, 4mfd:C, 4mfd:D, 4mfe:A, 4mfe:B, 4mfe:C, 4mfe:D, 4mim:A, 4mim:B, 4mim:C, 4mim:D, 3tw6:C, 3tw6:D
27 2qf7:A 1076 72 0.2875 0.0214 0.3194 0.14 3tw6:A
28 2npn:A 238 52 0.2000 0.0672 0.3077 0.48
29 6klg:A 547 71 0.2250 0.0329 0.2535 1.2 6kli:A, 6klj:A
30 3hm8:A 441 37 0.1750 0.0317 0.3784 1.9 3hm8:B, 3hm8:C, 3hm8:D
31 3ab9:A 127 35 0.1625 0.1024 0.3714 2.0
32 2b7r:A 568 45 0.2125 0.0299 0.3778 2.3 2b7s:A, 1e39:A, 1jrx:A, 1jrx:B, 1jry:A, 1jry:B, 1jrz:A, 1jrz:B, 1kss:A, 1ksu:A, 1ksu:B, 1lj1:A, 1lj1:B, 1m64:A, 1m64:B, 1p2e:A, 1p2h:A, 1q9i:A, 1qjd:A, 1y0p:A
33 5kpr:A 359 26 0.1250 0.0279 0.3846 3.0 6b3v:A, 2i7p:A, 2i7p:C, 2i7p:B, 2i7p:D, 5kpt:A, 5kpz:A, 5kq8:A, 3mk6:A, 3mk6:C, 3mk6:B, 3mk6:D, 6pe6:A, 3sms:A, 7ue3:A, 7ue4:A, 7ue5:A, 7ue6:A, 7ue7:A, 7ue8:A, 7ueo:A, 7uep:A, 7ueq:A, 7uer:A, 7ues:A, 7uet:A, 7ueu:A, 7uev:A, 7uex:A, 7uey:A, 6x4j:A, 6x4k:A, 6x4l:A
34 1qha:A 903 28 0.1375 0.0122 0.3929 4.1 1bg3:A, 1bg3:B, 1cza:N, 1dgk:N, 4f9o:A, 4f9o:B, 4foe:A, 4foe:B, 4foi:A, 4foi:B, 4fpa:A, 4fpa:B, 4fpb:A, 4fpb:B, 1hkb:A, 1hkb:B, 1hkc:A, 1qha:B
35 7px0:B 1253 57 0.2375 0.0152 0.3333 4.8 7px0:A, 7px0:C, 7px0:D
36 5hfu:B 897 28 0.1125 0.0100 0.3214 7.1 5hex:A, 5hex:B, 5hfu:A, 2nzt:A
37 5hg1:A 867 28 0.1125 0.0104 0.3214 7.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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