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BioLiP
>protein
EFPDYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAHC
MTFWYHMSGSHVGTLRVKLRYQKPEEYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGNLGGIAVDDISIN
NHISQEDCAKPAHH

The query sequence (length=174) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5l73:A 174 172 0.9885 0.9885 1.0000 2.98e-130 5l73:B
2 4gwm:A 561 125 0.2184 0.0677 0.3040 1.44e-09 7aq1:A, 7aq1:B, 7auw:A, 7auw:C, 4gwm:B, 4gwn:A
3 7uac:H 546 120 0.1954 0.0623 0.2833 8.49e-07 7uab:E, 7uab:H, 7uae:A, 7uaf:B, 7uaf:A, 7uaf:C, 7uaf:D, 7uai:E, 7uai:B, 7uai:C, 7uai:D
4 7uab:A 481 101 0.1667 0.0603 0.2871 0.003 7uab:D
5 7y80:A 1218 95 0.1609 0.0230 0.2947 0.025 8gu6:A
6 7y82:A 1341 95 0.1609 0.0209 0.2947 0.033
7 7y8t:A 1298 77 0.1264 0.0169 0.2857 0.79 8d9g:B, 7xsq:A, 7xsr:B, 7y8y:A
8 8d8n:B 1256 77 0.1264 0.0175 0.2857 0.82 8d9e:B, 8d9i:B, 7y81:A
9 7xss:B 1282 77 0.1264 0.0172 0.2857 0.86 8d9f:B, 8d9h:B, 7x8a:A, 7xso:A, 7xsp:B, 7xt4:B
10 8gna:A 1188 98 0.1494 0.0219 0.2653 1.0
11 8d97:A 1600 77 0.1264 0.0138 0.2857 1.2
12 7y84:A 1242 98 0.1494 0.0209 0.2653 1.3 7x7a:A, 7x7r:A, 7xc7:A, 7y83:A, 7y85:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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