Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DVTRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPRNLDKERAVLLQRRKR

The query sequence (length=65) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2lv9:A 80 65 1.0000 0.8125 1.0000 1.83e-44 4l58:A
2 7y0i:A 56 54 0.4769 0.5536 0.5741 1.94e-15
3 5tdr:A 70 64 0.4308 0.4000 0.4375 2.56e-12 5tdw:A
4 5tab:A 53 48 0.3077 0.3774 0.4167 2.38e-10
5 5tbn:A 57 48 0.3077 0.3509 0.4167 9.78e-10
6 1wee:A 72 45 0.3231 0.2917 0.4667 4.31e-07
7 1wem:A 76 53 0.2923 0.2500 0.3585 6.22e-06 4l7x:A, 2m3h:A
8 8f8y:B 433 47 0.2615 0.0393 0.3617 1.10e-05 8f8y:A, 8f8z:A, 8f8z:B, 3kqi:A, 7m10:A, 3pu3:A, 3pu3:B, 3pu8:B, 3pu8:A, 3pua:A, 3pus:A, 3pus:B
9 9c0o:A 63 54 0.3385 0.3492 0.4074 2.75e-05
10 6wxk:B 51 48 0.2308 0.2941 0.3125 3.14e-05 6wxk:A, 6wxk:C, 6wxk:D, 6wxk:E
11 2puy:B 60 54 0.2923 0.3167 0.3519 3.78e-05 2puy:A
12 3o70:A 55 47 0.2000 0.2364 0.2766 4.02e-05 3o7a:A
13 2rsd:A 68 52 0.2923 0.2794 0.3654 5.23e-05
14 6ryr:W 708 42 0.2462 0.0226 0.3810 1.27e-04 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
15 3kv6:D 448 46 0.2615 0.0379 0.3696 3.05e-04 3kv5:D, 3kv5:A, 3kv6:A, 3kv9:A, 3kva:A, 3u78:A
16 5wlf:A 60 32 0.2154 0.2333 0.4375 5.61e-04 5wle:A
17 2f6j:A 168 47 0.2769 0.1071 0.3830 6.24e-04 8ag2:A, 6aze:A, 7dmy:A, 7dn4:A, 7dn4:B, 7dn4:C, 7dn4:D, 7dn4:E, 7dn4:F, 7f5c:A, 7f5d:A, 7f5e:A, 2f6j:B, 2f6j:C, 2f6n:A, 2f6n:B, 8f6g:A, 2fsa:A, 2fsa:B, 2fsa:C, 2fuu:A, 5h6y:A, 7k6r:A, 7k6s:A, 7kdw:A, 7kdw:B, 7kdz:A, 7lp0:A, 7lp0:B, 7lpk:A, 7lpk:B, 7lrk:A, 7lrk:B, 7lro:A, 7lro:B, 6lu5:A, 6lu6:A, 7m2e:A, 8ou2:A, 8ou2:B, 3qzs:A, 3qzs:B, 3qzt:A, 3qzv:A, 5r4g:A, 5r4h:A, 5r4i:A, 5r4j:A, 5r4k:A, 5r4l:A, 5r4m:A, 5r4n:A, 2ri7:A, 7rwn:A, 7rwo:A, 7rwp:A, 7rwq:A, 7vd4:A
18 3kv4:A 432 47 0.2462 0.0370 0.3404 7.04e-04 4do0:A, 3k3n:A, 3k3o:A, 2wwu:A
19 1wew:A 78 54 0.2615 0.2179 0.3148 0.001
20 3n9m:A 503 40 0.1846 0.0239 0.3000 0.004 3n9l:A, 3n9m:C, 3n9n:A, 3n9o:A, 3n9p:A, 3n9q:A, 3puq:A, 3puq:C, 3pur:A, 3pur:C
21 2ke1:A 66 42 0.2308 0.2273 0.3571 0.011 2kft:A, 1xwh:A
22 6q3m:C 219 43 0.2462 0.0731 0.3721 0.022 6q3m:A, 6q3m:B
23 2yql:A 56 44 0.2308 0.2679 0.3409 0.023
24 6guu:B 204 37 0.2154 0.0686 0.3784 0.047 6guu:A
25 1mm3:A 61 43 0.2308 0.2459 0.3488 0.083
26 2e6s:A 77 45 0.2000 0.1688 0.2889 0.088
27 6j2p:A 98 65 0.3077 0.2041 0.3077 0.12 6j2p:B, 6j2p:D, 6j2p:C
28 1f62:A 51 45 0.2154 0.2745 0.3111 0.29
29 5b79:A 118 57 0.2615 0.1441 0.2982 0.49 5vdc:A
30 1we9:A 64 42 0.2308 0.2344 0.3571 0.50
31 8bpa:C 213 54 0.2308 0.0704 0.2778 0.54 8c60:C
32 4tvr:A 222 26 0.1538 0.0450 0.3846 0.60
33 5z8l:A 204 46 0.2154 0.0686 0.3043 0.72 5z8n:A, 5z8n:B, 5z8n:C
34 7zpq:CA 1742 50 0.2154 0.0080 0.2800 0.89 7zrs:CA, 7zuw:CA
35 1wep:A 79 36 0.2000 0.1646 0.3611 1.2
36 5vab:A 54 43 0.1846 0.2222 0.2791 1.2
37 2m85:A 65 47 0.2308 0.2308 0.3191 1.3
38 8ge0:A 188 47 0.2615 0.0904 0.3617 1.4 8gdx:A, 8ge0:B, 8ge0:C
39 2l43:A 80 44 0.2000 0.1625 0.2955 1.5 2ku3:A
40 8hxx:N 375 45 0.2000 0.0347 0.2889 1.5 8hxy:N, 8hy0:N, 8i3f:B, 8jho:N, 8tof:G, 8w9c:E, 8w9d:E, 8w9e:E, 8w9f:E
41 5znp:B 186 46 0.2154 0.0753 0.3043 1.6 5znp:A, 5znr:A, 5znr:B
42 2k16:A 75 42 0.2154 0.1867 0.3333 1.6 5c13:A, 5c13:C, 5c13:E, 5c13:G, 2k17:A, 5wxg:A, 5wxh:C, 5wxh:A, 5xmy:A, 5xmy:C
43 5y20:A 52 26 0.1692 0.2115 0.4231 1.7
44 8ihn:M 357 45 0.2000 0.0364 0.2889 1.8 8kd4:E
45 4gy5:A 215 45 0.2000 0.0605 0.2889 1.9 3ask:A, 3ask:B, 3ask:D, 3asl:A, 3db3:A, 7fb7:B, 4gy5:B, 6iiw:A, 2lgg:A, 2lgk:A, 2lgl:A, 4qqd:A, 4qqd:B, 3shb:A, 3sou:A, 3sou:B, 3sow:A, 3sow:B, 3sox:A, 3sox:B, 3t6r:B, 3t6r:A, 8wms:A, 5xpi:A, 5yy9:A, 5yy9:B, 3zvy:A, 3zvy:B, 3zvz:B
46 1yp1:A 199 15 0.1385 0.0452 0.6000 2.2
47 7yi2:D 321 45 0.2000 0.0405 0.2889 2.3 7yi0:D, 7yi3:D, 7yi4:D, 7yi5:D
48 7qug:A 397 26 0.1692 0.0277 0.4231 3.2
49 5yc3:A 60 39 0.2308 0.2500 0.3846 3.4 5yc4:A
50 8kd6:E 301 45 0.2000 0.0432 0.2889 3.6 8kd2:E
51 5hh7:A 192 49 0.2000 0.0677 0.2653 4.0
52 1fp0:A 88 65 0.2923 0.2159 0.2923 5.0
53 6z69:B 364 16 0.1231 0.0220 0.5000 5.3 6z69:A
54 6g8r:B 164 33 0.2154 0.0854 0.4242 5.9 2md7:B, 2md8:C
55 3o36:A 184 49 0.2154 0.0761 0.2857 7.0 7b9x:A, 5h1t:A, 5h1t:B, 5h1t:C, 5h1t:D, 5h1u:B, 5h1u:A, 5h1u:C, 5h1u:D, 5h1v:A, 5h1v:B, 3o33:A, 3o33:B, 3o33:C, 3o33:D, 3o34:A, 3o35:B, 3o35:A, 3o36:B, 3o37:A, 3o37:B, 3o37:C, 3o37:D, 4yab:A, 4yab:B, 4yad:A, 4yad:B, 4yat:A, 4yat:B, 4yax:A, 4yax:B, 4ybm:A, 4ybm:B, 4ybs:A, 4ybt:A, 4yc9:A, 4zql:A, 4zql:B
56 2hnk:B 232 24 0.1077 0.0302 0.2917 8.9 2hnk:A, 2hnk:C

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218