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BioLiP
>protein
DVSCSICLDAVVAAGGERSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRKIEKGNWLYA

The query sequence (length=60) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8i3x:A 60 60 1.0000 1.0000 1.0000 8.01e-41 8i3x:B
2 6y5p:B 229 67 0.3500 0.0917 0.3134 7.80e-07 6y5n:A, 6y5n:B, 6y5p:A
3 6y2x:A 231 66 0.3333 0.0866 0.3030 8.34e-05 6ir0:A, 6y22:A, 6y3j:A
4 6f98:A 78 66 0.3500 0.2692 0.3182 0.002
5 1v87:A 114 64 0.3667 0.1930 0.3438 0.003
6 6a3z:A 56 50 0.3000 0.3214 0.3600 0.003
7 7t92:C 317 48 0.2833 0.0536 0.3542 0.004
8 5olm:B 132 51 0.3000 0.1364 0.3529 0.006 5jpx:A, 5olm:A
9 4lad:B 69 47 0.3000 0.2609 0.3830 0.006
10 2lxh:C 58 47 0.3000 0.3103 0.3830 0.006 2lxp:C
11 7bbd:B 160 51 0.3000 0.1125 0.3529 0.007 8a58:C, 8a58:D, 8c07:I, 8f1f:C, 8f1f:c, 6fga:A, 6fga:B, 6fga:C, 6fga:D, 6fga:E, 6fga:F, 6fga:G, 6fga:H, 5m93:B, 5m93:C, 7nbb:C, 5o44:E, 6s53:B, 6s53:A, 6s53:H, 6s53:G, 3zlz:B
12 6w7z:B 71 49 0.2500 0.2113 0.3061 0.007 6w9a:B, 6w9a:D, 6w9d:B, 6w9d:E, 6w9d:H
13 7bvw:A 79 48 0.3000 0.2278 0.3750 0.015 7bvw:B
14 2ysl:A 73 59 0.3000 0.2466 0.3051 0.019 2ysj:A
15 5a31:B 84 32 0.2500 0.1786 0.4688 0.039 5g04:B, 5g05:B, 9gaw:C, 5jg6:A, 5jg6:D, 2mt5:A, 7qe7:C, 4r2y:A, 4r2y:B, 4r2y:C, 4r2y:D, 8s4g:C, 6tm5:B, 6tnt:B, 4ui9:B
16 1iym:A 55 49 0.2667 0.2909 0.3265 0.047
17 5hvq:C 236 46 0.2333 0.0593 0.3043 0.084 5wy5:A
18 1wes:A 71 47 0.2667 0.2254 0.3404 0.11 2g6q:A
19 8adl:A 633 25 0.1833 0.0174 0.4400 0.16 8adl:I
20 2qic:A 51 47 0.2667 0.3137 0.3404 0.19
21 6y2x:B 177 61 0.3000 0.1017 0.2951 0.25
22 8aaf:e 1527 48 0.2333 0.0092 0.2917 0.27 8agt:e, 8agu:e, 8agv:e, 8agw:e, 8agx:e, 8agz:e
23 7dg2:A 231 48 0.2500 0.0649 0.3125 0.38
24 2kiz:A 69 48 0.2833 0.2464 0.3542 0.52 5lg0:A, 5lg7:A, 7p2k:A
25 2mum:A 50 27 0.1833 0.2200 0.4074 0.52
26 8ow6:A 149 46 0.2333 0.0940 0.3043 0.62 8ow6:C
27 5d0m:C 60 48 0.2833 0.2833 0.3542 0.63 5ulh:C, 5ulk:C
28 4v3k:C 75 28 0.2000 0.1600 0.4286 0.67 7ojx:A, 4v3k:F, 4v3l:C
29 2ct0:A 74 25 0.1500 0.1216 0.3600 0.89
30 5zbu:A 74 48 0.2500 0.2027 0.3125 1.2 5zbu:D, 5zc4:A, 5zc4:D
31 3t6p:A 330 53 0.2667 0.0485 0.3019 1.2 3d9t:A, 3d9t:B, 3d9u:A, 8dsf:A, 8dsf:B, 8dsf:C, 8dsf:D, 8dso:D, 4eb9:A, 4eb9:B, 4eb9:C, 4eb9:D, 6exw:A, 6exw:C, 6hpr:A, 4hy4:A, 4hy4:B, 4hy5:A, 4hy5:B, 4lge:A, 4lge:B, 4lgu:A, 4lgu:B, 5m6n:A, 5m6n:B, 4mti:A, 4mti:B, 3mup:A, 3mup:B, 3mup:C, 3mup:D, 4mu7:A, 4mu7:B, 3oz1:A, 3oz1:B, 3oz1:C, 3oz1:D, 1qbh:A, 7trm:A, 3uw4:A, 6w74:A, 6w7o:C, 6w7o:D, 6w8i:F, 6w8i:D, 6w8i:E
32 5dka:A 96 47 0.2333 0.1458 0.2979 1.2 5dka:B, 8gbq:B, 8gcb:B
33 5o6c:A 252 58 0.2667 0.0635 0.2759 1.3 6t7f:A
34 9atn:A 98 28 0.1833 0.1122 0.3929 1.3
35 1x4j:A 75 28 0.2000 0.1600 0.4286 1.4
36 2l0b:A 91 50 0.2833 0.1868 0.3400 1.6
37 8ow6:B 149 46 0.2333 0.0940 0.3043 2.1 8ow6:D
38 2o7p:A 358 21 0.1667 0.0279 0.4762 2.7 2o7p:B, 2obc:A
39 3j92:0 36 28 0.1500 0.2500 0.3214 3.0
40 7cyi:D 378 26 0.2000 0.0317 0.4615 3.1 7cyi:A, 7cyi:B, 7cyi:C, 6ljh:A
41 6hrk:A 135 48 0.2333 0.1037 0.2917 3.5 6hrk:B, 6hrk:C, 6hrk:D
42 1x4i:A 70 26 0.1667 0.1429 0.3846 5.6 7zmx:A, 7zmx:B
43 5vo0:D 159 44 0.2667 0.1006 0.3636 7.6 5vnz:A, 5vnz:D, 5vo0:A
44 2ect:A 78 55 0.2667 0.2051 0.2909 8.6
45 6t5k:C 224 17 0.1500 0.0402 0.5294 9.0
46 4yhg:A 389 15 0.1333 0.0206 0.5333 9.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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