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BioLiP
>protein
DPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR

The query sequence (length=65) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1zlk:A 65 65 1.0000 1.0000 1.0000 6.16e-42 1zlk:B
2 4wu4:B 68 55 0.4154 0.3971 0.4909 9.46e-15 4wu4:A, 4wuh:B, 4wuh:A, 4wul:A, 4wul:B
3 5hev:F 210 62 0.4923 0.1524 0.5161 1.03e-14 5hev:A, 5hev:B, 5hev:C
4 4zmr:A 207 57 0.3846 0.1208 0.4386 1.00e-10 4e7o:A, 4e7o:B, 4e7p:A, 4e7p:B, 4zmr:B, 4zms:A, 4zms:B
5 4if4:A 208 55 0.3538 0.1106 0.4182 6.36e-09 4if4:B, 4if4:C, 4if4:D, 7ve5:B, 7ve5:A, 7ve6:A, 7ve6:B
6 4yn8:A 201 64 0.3692 0.1194 0.3750 4.03e-08
7 3klo:A 217 55 0.3077 0.0922 0.3636 1.82e-07 3klo:B, 3klo:C
8 1je8:E 67 60 0.3692 0.3582 0.4000 2.12e-07 1je8:A, 1je8:B, 1je8:F, 8u3b:G, 8u3b:H, 1zg1:A, 1zg1:B, 1zg1:E, 1zg1:F, 1zg5:A, 1zg5:B, 1zg5:E, 1zg5:F
9 4ldz:A 196 51 0.3077 0.1020 0.3922 1.40e-06 5iuk:C, 5iul:C, 5iul:F, 4ldz:B, 4le0:A, 4le0:B, 7ssj:B, 7ssj:E, 7ssj:F
10 1yio:A 198 48 0.3077 0.1010 0.4167 4.99e-04 1zn2:A
11 8a5r:AAA 206 60 0.2923 0.0922 0.3167 0.010 8a5s:AAA, 3p7n:A, 3p7n:B
12 4y13:A 244 59 0.2462 0.0656 0.2712 0.055 2avx:A, 4y15:A, 4y15:B, 4y15:C, 4y17:A, 4y17:B, 4y17:C
13 6ugl:A 200 50 0.2769 0.0900 0.3600 0.12
14 6ide:B 228 50 0.2769 0.0789 0.3600 0.14 6ide:A, 6kju:A, 6kju:B, 6ugl:B
15 5xt2:B 204 46 0.2000 0.0637 0.2826 0.67 5xt2:A, 5xt2:C, 5xt2:D, 5xt2:E
16 1ywq:A 199 32 0.2154 0.0704 0.4375 2.2
17 5cvi:B 215 27 0.1692 0.0512 0.4074 2.9 5cvi:A
18 2q0o:A 235 62 0.2615 0.0723 0.2742 4.2 2q0o:B
19 6v7w:E 234 58 0.2462 0.0684 0.2759 4.3 6d6a:A, 6d6a:B, 6d6a:C, 6d6a:D, 6d6a:E, 6d6a:F, 6d6a:G, 6d6a:H, 6d6b:A, 6d6b:B, 6d6b:C, 6d6b:D, 6d6b:E, 6d6b:F, 6d6b:G, 6d6b:H, 6d6c:A, 6d6c:B, 6d6c:C, 6d6c:D, 6d6c:E, 6d6c:F, 6d6c:G, 6d6c:H, 6d6c:I, 6d6c:J, 6d6c:K, 6d6c:L, 6d6d:A, 6d6d:B, 6d6l:A, 6d6l:B, 6d6l:C, 6d6l:D, 6d6m:A, 6d6m:B, 6d6m:C, 6d6m:D, 6d6n:A, 6d6n:B, 6d6n:C, 6d6n:D, 6d6o:A, 6d6o:B, 6d6o:C, 6d6o:D, 6d6p:A, 6d6p:B, 6d6p:C, 6d6p:D, 3ix3:A, 3ix3:B, 3ix4:A, 3ix4:B, 3ix4:C, 3ix4:D, 3ix4:E, 3ix4:F, 3ix4:G, 3ix4:H, 3ix8:A, 3ix8:B, 3ix8:C, 3ix8:D, 3jpu:A, 3jpu:B, 3jpu:C, 3jpu:D, 3jpu:E, 6mvm:A, 6mvm:B, 6mvn:A, 6mvn:B, 6mwh:A, 6mwh:B, 6mwl:A, 6mwl:B, 6mww:A, 6mww:B, 6mwz:A, 6mwz:B, 4ng2:A, 4ng2:B, 4ng2:C, 4ng2:D, 2uv0:E, 2uv0:F, 2uv0:G, 2uv0:H, 6v7w:B, 6v7x:B
20 5o8z:B 209 47 0.2154 0.0670 0.2979 7.0 5o8z:A, 5vxn:A, 5vxn:B, 5vxn:C, 5vxn:D, 5w43:A, 5w43:B, 6zii:B, 6zii:A, 6zix:B, 6zix:A, 6zj2:D, 6zj2:C, 6zj2:B, 6zj2:A
21 6ogz:A 1082 48 0.3077 0.0185 0.4167 7.7 6ogy:A, 6oj6:P, 2r7r:A, 2r7s:A, 2r7t:A, 2r7u:A, 2r7v:A, 2r7w:A, 2r7x:A, 2r7x:B
22 6xyw:Bs 66 28 0.1538 0.1515 0.3571 8.1
23 8xvg:L 3485 33 0.1692 0.0032 0.3333 8.4 8xvv:L
24 7ktr:A 3042 33 0.1692 0.0036 0.3333 8.7
25 2aly:B 785 56 0.2923 0.0242 0.3393 9.4 2amc:B, 1eiy:B, 3hfz:B, 2iy5:B, 1jjc:B, 3teh:B, 4tva:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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