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BioLiP
>protein
DIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHV
VVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDA
VPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV

The query sequence (length=216) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1ds7:A 217 216 1.0000 0.9954 1.0000 4.07e-162 8c5e:A, 8c5e:B, 8c5f:A, 8c5f:B, 8c5p:A, 8c5p:B, 8ccv:A, 8ccv:B, 8cj0:A, 8cj0:B, 1ds7:B, 1icr:A, 1icr:B, 1icu:A, 1icu:B, 1icu:C, 1icu:D, 1icv:A, 1icv:B, 1icv:C, 1icv:D, 1idt:A, 1idt:B, 8og3:A, 8og3:B, 1oo5:A, 1oo5:B, 1oo6:A, 1oo6:B, 1oon:A, 1oon:B, 1ooq:A, 1ooq:B, 8qes:A, 8qes:C, 8qes:B, 8qes:D, 8qpo:A, 8qpo:B, 8qpo:C, 8qpo:G, 8qpo:D, 8qpo:E, 8qpo:F, 8qpo:H, 3x21:A, 3x21:B, 3x21:C, 3x21:D, 3x21:E, 3x21:F, 3x21:G, 3x21:H, 3x21:I, 3x21:J, 3x22:A, 3x22:B, 7x32:A, 7x32:C, 7x32:B, 7x32:H, 7x32:D, 7x32:F, 7x32:E, 7x32:G, 7xww:B, 7xww:A, 7xww:H, 7xww:I, 1yki:A, 1yki:B, 1yki:C, 1yki:D, 1ylr:A, 1ylr:B, 1ylu:A, 1ylu:B
2 5j8d:A 216 216 0.8796 0.8796 0.8796 1.47e-141 5j8d:B, 5j8d:C, 5j8d:D, 5j8g:A, 5j8g:B, 5j8g:C, 5j8g:D, 1kqb:A, 1kqb:B, 1kqb:C, 1kqb:D, 1kqc:A, 1kqc:B, 1kqc:C, 1kqc:D, 1kqd:A, 1kqd:B, 1kqd:C, 1kqd:D, 1nec:A, 1nec:B, 1nec:C, 1nec:D
3 8dor:A 217 216 0.8380 0.8341 0.8380 7.01e-137 8dor:B, 8dor:C, 8dor:D
4 6czp:A 219 215 0.6111 0.6027 0.6140 6.39e-97 6czp:B, 6czp:C, 6czp:D, 6czp:E, 6czp:F, 6czp:G, 6czp:H, 7uwt:A, 7uwt:B
5 1v5y:A 217 199 0.3148 0.3134 0.3417 4.21e-31 1v5y:B, 1v5z:A, 1v5z:B, 1vfr:A, 1vfr:B
6 6wt2:A 221 222 0.3102 0.3032 0.3018 1.07e-17 6wt2:B, 6wt2:C, 6wt2:D
7 8qyg:B 225 217 0.3009 0.2889 0.2995 1.41e-17 8q5g:A, 8q5g:B, 8qyg:A
8 7jh4:A 223 186 0.2778 0.2691 0.3226 3.87e-15 7jh4:B, 7jh4:C, 7jh4:D, 7jh4:E
9 3qdl:A 178 160 0.2037 0.2472 0.2750 5.27e-15 3qdl:B, 3qdl:C, 3qdl:D
10 7s14:B 223 172 0.2361 0.2287 0.2965 5.42e-15 7ldq:A, 7rzl:A, 7rzl:B, 7rzp:A, 7rzp:B, 7s14:A, 7s14:C, 7s14:D, 7s1a:A, 7s1a:B, 7t2z:A, 7t2z:B, 7t33:A, 7t33:B
11 3of4:A 208 202 0.2361 0.2452 0.2525 7.08e-14 3of4:B, 3of4:C
12 3ge6:A 210 215 0.2593 0.2667 0.2605 5.66e-13 3ge6:B
13 4qlx:A 217 206 0.2546 0.2535 0.2670 1.53e-10 4qlx:B, 4qly:A, 4qly:B, 4qly:C, 4qly:D
14 3gbh:B 213 205 0.2361 0.2394 0.2488 2.14e-10 3gbh:A, 3gbh:C, 3gbh:D
15 8cqt:B 164 65 0.1065 0.1402 0.3538 5.67e-09 8cqt:A
16 2h0u:A 196 223 0.2269 0.2500 0.2197 1.04e-08
17 7vqk:A 195 181 0.2176 0.2410 0.2597 8.18e-08 7vqk:B
18 3gag:A 206 184 0.2176 0.2282 0.2554 1.46e-07 3gag:B, 3gag:C, 3gag:D
19 2hay:D 222 139 0.1806 0.1757 0.2806 3.09e-07 2hay:A, 2hay:B, 2hay:C
20 3ge5:A 176 44 0.0787 0.0966 0.3864 2.80e-04 3ge5:B
21 2b67:A 201 59 0.1065 0.1144 0.3898 7.71e-04 2b67:B, 2b67:C, 2b67:D
22 3koq:A 173 95 0.1065 0.1329 0.2421 0.001 3h4o:A, 3koq:B, 3koq:C, 3koq:D
23 2fre:A 200 73 0.1111 0.1200 0.3288 0.005 2fre:B
24 3gr3:A 226 51 0.0926 0.0885 0.3922 0.006 3gr3:B
25 4eo3:A 321 149 0.1713 0.1153 0.2483 0.032 4eo3:B
26 3bem:B 210 197 0.1759 0.1810 0.1929 0.033 3bem:A
27 5ko7:B 200 82 0.0880 0.0950 0.2317 0.065
28 5j62:B 209 41 0.0787 0.0813 0.4146 0.081 5j62:A
29 1usy:B 275 84 0.1204 0.0945 0.3095 0.12 1usy:C, 1usy:D
30 3gfa:A 197 58 0.0787 0.0863 0.2931 0.13 3gfa:B
31 5ko8:B 218 55 0.0741 0.0734 0.2909 0.31 5ko7:A, 5ko8:A, 5krd:A, 5krd:B
32 1zch:A 249 74 0.1019 0.0884 0.2973 0.35
33 6pz0:A 185 62 0.0833 0.0973 0.2903 0.35 6pz0:B, 6q1b:A, 6q1b:B, 6q1l:A, 6q1l:B, 6tyk:A, 6tyk:B
34 2wzv:B 223 51 0.0833 0.0807 0.3529 0.63 2wzv:A, 2wzw:A, 2wzw:B
35 7lt2:A 387 51 0.0833 0.0465 0.3529 0.70
36 2hk6:A 309 71 0.1019 0.0712 0.3099 0.96 1c1h:A, 1c9e:A, 1ld3:A, 3m4z:A, 2q2n:A, 2q2o:A, 2q3j:A
37 7dp0:A 223 184 0.1898 0.1839 0.2228 0.98 7dp0:B, 7dp1:A, 7dp1:B, 7dp2:A, 7dp2:B
38 4g8s:A 182 94 0.1065 0.1264 0.2447 1.0 4g8s:B
39 4ttb:A 189 87 0.0787 0.0899 0.1954 1.2 4ttb:B
40 3e10:B 167 55 0.0787 0.1018 0.3091 2.2 3e10:A
41 4dn2:A 191 87 0.0787 0.0890 0.1954 2.4 4dn2:B
42 3m5k:A 168 88 0.0926 0.1190 0.2273 2.7 3m5k:B
43 3bm1:A 177 58 0.0833 0.1017 0.3103 2.9 3bm1:B
44 1nox:A 200 213 0.2731 0.2950 0.2770 3.0
45 2g2n:C 112 59 0.0880 0.1696 0.3220 5.3 2g2n:A, 2g2n:B, 2g2n:D, 2g2p:A, 2g2p:B, 2g2p:C, 2g2p:D
46 5j6c:A 173 96 0.0972 0.1214 0.2188 5.9 5j6c:B
47 3ek3:A 187 92 0.1019 0.1176 0.2391 6.7
48 8w0b:A 667 45 0.0602 0.0195 0.2889 7.8 7kds:A, 8v4o:A, 8v4o:B, 8v4o:C, 8v4p:A, 8v4p:B, 8v4p:C, 8v4r:A, 8v4r:B, 8v4r:C, 8w0b:B, 8w0b:C, 8w0c:A, 8w0c:B, 8w0c:C, 8w0d:A, 8w0d:B, 8w0d:C, 8w0h:A, 8w0h:B, 8w0h:C, 8w0j:A, 8w0j:B, 8w0j:C, 8w0l:A, 8w0l:B, 8w0l:C, 8w0m:A, 8w0m:B, 8w0m:C
49 5ikb:A 249 47 0.0833 0.0723 0.3830 8.8
50 3kwk:A 168 73 0.0926 0.1190 0.2740 9.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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