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BioLiP
>protein
DHLSKIFLTISKSITQNPWNEENLLPLWLKWLLTLKSGELNSIKDKHTKKNCKHLKSALRSSEEILPVLLGIQGRLEMLR
RQAKLRED

The query sequence (length=88) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7d4i:A9 128 88 1.0000 0.6875 1.0000 1.65e-58 7aju:UI, 7d5s:A9, 7d63:A9, 6ke6:A9, 6lqp:A9, 6lqq:A9, 6lqr:A9, 6lqs:A9, 6lqt:A9, 6lqu:A9, 6lqv:A9, 6zqb:UI
2 7d5s:A5 514 53 0.2045 0.0350 0.3396 0.037 7ajt:UE, 6ke6:A5, 6lqp:A5, 6lqq:A5, 6lqu:A5, 6nd4:L, 7suk:LL, 5wlc:LL, 6zqa:UE, 6zqb:UE, 6zqc:UE
3 8i22:A 530 26 0.1364 0.0226 0.4615 0.53 8i22:F, 8i22:B, 8i22:C, 8i22:D, 8i22:E, 8i3i:A, 8i3i:D, 8i3i:B, 8i3i:C, 8i49:A, 8i49:D, 8i49:E, 8i49:F, 8i49:C, 8i49:B, 8i51:A, 8i51:B, 8i51:C, 8i51:D, 8i51:E, 8i51:F, 8i6m:A, 8i6m:F, 8i6m:D, 8i6m:C, 8i6m:B, 8i6m:E, 8i8d:A, 8i8d:B, 8i8d:C, 8i8d:D, 8i8d:E, 8i8d:F, 8i8e:F, 8i8e:D, 8i8e:A, 8i8e:B, 8i8e:C, 8i8e:E, 8jyl:A, 8jyl:B, 8jyl:C, 8jyl:D, 8jyl:E, 8jyl:F, 8jyu:A, 8jyu:D, 8jyu:B, 8jyu:C, 8jyu:E, 8jyu:F
4 7c9i:C 243 34 0.1364 0.0494 0.3529 1.4 7d8x:C, 6idf:C, 8im7:C, 6iyc:C, 8k8e:C, 8kco:C, 8kcp:C, 8kcs:C, 8kct:C, 8kcu:C, 6lqg:C, 6lr4:C, 8x52:C, 8x53:C, 8x54:C, 7y5t:C, 7y5x:C, 7y5z:C
5 3jd5:c 168 66 0.2045 0.1071 0.2727 1.4 6neq:c, 6nf8:c
6 8uiv:A 375 48 0.1591 0.0373 0.2917 1.6 5eow:A, 8uiq:A
7 6rxt:UE 125 60 0.2045 0.1440 0.3000 4.9 6rxu:UE, 6rxv:UE, 6rxy:UE, 6rxz:UE
8 7u3d:C 677 38 0.1250 0.0162 0.2895 6.8
9 8pp6:G 109 53 0.1705 0.1376 0.2830 8.8 8pp7:G, 2pyo:G, 8ux1:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417