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BioLiP
>protein
DADLAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGSSGVWGQIPMPPNVNVSDADAKALADWILTL
K

The query sequence (length=81) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1a56:A 81 81 1.0000 1.0000 1.0000 5.80e-54 1a8c:A, 4jcg:A, 3zow:A, 3zow:B, 3zow:C, 3zow:D, 3zow:E, 3zow:F, 3zow:G, 3zow:H, 3zow:I, 3zow:J, 3zow:K, 3zow:L, 3zow:M, 3zow:N, 3zow:O, 3zow:P, 3zow:Q, 3zow:R, 3zox:A, 3zox:B, 3zox:C, 3zox:D, 3zoy:A, 3zoy:B, 3zoy:C, 3zoy:D
2 5xec:A 82 78 0.5926 0.5854 0.6154 7.36e-30 5xed:A
3 5aur:A 83 84 0.5926 0.5783 0.5714 1.07e-27 2ai5:A, 5aur:C, 5aur:E, 5aur:G, 5aus:A, 5aus:C, 1ayg:A, 3vym:A, 1ynr:A, 1ynr:B, 1ynr:C, 1ynr:D, 4zid:A
4 1cor:A 82 78 0.5679 0.5610 0.5897 2.60e-27 6kq1:A, 6kq1:B
5 5xec:C 80 81 0.5432 0.5500 0.5432 4.90e-26 5xed:C
6 351c:A 82 78 0.5432 0.5366 0.5641 5.97e-26 451c:A, 1dvv:A, 2exv:A, 2exv:C, 2pac:A, 3x39:A, 3x39:B
7 1cch:A 82 78 0.5679 0.5610 0.5897 1.56e-25 1fi3:A, 2i8f:A
8 2d0s:A 79 81 0.4691 0.4810 0.4691 6.81e-23
9 4xxl:A 92 81 0.3704 0.3261 0.3704 5.66e-10
10 3x15:A 87 83 0.3827 0.3563 0.3735 1.43e-08 3x15:G, 3x15:D, 3x15:J, 2zxy:A
11 4xyd:B 145 80 0.2716 0.1517 0.2750 8.68e-05
12 5z25:A 96 32 0.1728 0.1458 0.4375 0.002
13 5z25:A 96 26 0.1481 0.1250 0.4615 9.4
14 5guw:A 142 74 0.2222 0.1268 0.2432 0.003 5guw:C, 5gux:C, 3o0r:C, 3wfb:C, 3wfc:C, 3wfd:C, 3wfe:C
15 3cp5:A 116 37 0.1605 0.1121 0.3514 0.004 6cuk:A, 6cun:A
16 1h31:B 138 33 0.1728 0.1014 0.4242 0.023 1h31:D, 1h31:F, 1h31:H, 1h32:B, 1h33:B, 2oz1:B, 2oz1:D, 2oz1:F, 2oz1:H
17 1fj0:A 114 74 0.2716 0.1930 0.2973 0.039 1fj0:B, 1fj0:C, 1fj0:D, 1hh7:A, 1i8o:A, 1i8p:A, 1i8p:B, 1i8p:C, 1i8p:D
18 8hev:H 417 29 0.1728 0.0336 0.4828 0.24 8hev:A, 8hev:B, 8hev:C, 8hev:U, 8hev:G, 8hev:J, 8hev:L, 8hev:V, 8hev:I, 8hev:K, 8hev:M
19 8gyg:B 305 37 0.1975 0.0525 0.4324 0.46 8gyg:A
20 1qn2:A 99 19 0.1235 0.1010 0.5263 0.98 1qn2:B, 1qn2:C
21 1fcd:C 174 22 0.1358 0.0632 0.5000 1.1 1fcd:D
22 5znj:A 563 47 0.1358 0.0195 0.2340 1.7 5znk:A
23 3vrd:A 174 74 0.2593 0.1207 0.2838 3.2
24 6m0q:A 504 51 0.1975 0.0317 0.3137 6.6 4fas:A, 4fas:C, 4fas:B, 1fgj:A, 1fgj:B, 6m0p:A, 6m0p:C, 6m0p:E, 6m0q:C, 6m0q:E, 6m0q:G, 6m0q:I, 6m0q:K, 4n4n:A, 4n4n:C, 4n4n:E, 4n4o:A, 4n4o:C, 4n4o:E
25 3oa8:B 180 22 0.1358 0.0611 0.5000 7.2 3oa8:D, 3oa8:F, 3ocd:B, 3ocd:D
26 6q09:A 162 19 0.0988 0.0494 0.4211 9.4 6tyj:A
27 1kop:A 223 22 0.1235 0.0448 0.4545 9.5 8dpc:A, 8dpc:C, 8dpc:E, 8dpc:G, 8dpo:A, 8dpo:C, 8dpo:E, 8dpo:G, 8dqf:A, 8dqf:C, 8dqf:E, 8dqf:G, 8dr2:A, 8dr2:C, 8dr2:E, 8dr2:G, 8drb:A, 8drb:C, 8drb:E, 8drb:G, 8dyq:A, 8dyq:C, 8dyq:E, 8dyq:G, 1kop:B, 1koq:A, 1koq:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218