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BioLiP
>protein
AVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPD
DR

The query sequence (length=82) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1hko:A 104 82 1.0000 0.7885 1.0000 6.10e-58 1aqa:A, 1cyo:A, 1ehb:A, 1es1:A, 1f03:A, 1f04:A, 1i5u:A, 1ib7:A, 1j0q:A, 1jex:A, 1lqx:A, 1lr6:A, 1m20:A, 1m2i:A, 1m2m:A, 1m59:A, 1nx7:A, 1sh4:A, 1u9m:A, 1u9m:B, 1u9m:C, 1u9m:D, 1u9m:E, 1u9m:F, 1u9u:A, 3x32:A, 3x33:A, 3x34:A, 3x35:A
2 2i96:A 108 82 0.9634 0.7315 0.9634 8.10e-56 4hin:A, 4hin:B, 4hin:C, 4hin:D, 2m33:A
3 1aw3:A 94 81 0.9268 0.8085 0.9383 2.74e-53 1axx:A, 2axx:A, 1b5a:A, 1b5b:A, 1bfx:A, 1blv:A, 1do9:A, 1mny:A
4 3ozz:B 82 82 0.8537 0.8537 0.8537 1.95e-50
5 2i89:A 90 81 0.7195 0.6556 0.7284 1.88e-42 2i89:B, 2i89:C, 2i89:D, 1icc:A, 1icc:B, 1icc:D, 1lj0:A, 1lj0:B, 1lj0:C, 1lj0:D, 3mus:B
6 1awp:A 86 81 0.6098 0.5814 0.6173 4.89e-36 1awp:B, 1b5m:A, 1eue:A, 1eue:B, 4hil:A, 4hil:B, 1icc:C, 3mus:A
7 3ner:B 91 81 0.6220 0.5604 0.6296 2.54e-35 3ner:A
8 2ibj:A 86 81 0.5976 0.5698 0.6049 3.65e-32
9 4b8n:B 90 74 0.3780 0.3444 0.4189 1.65e-13 4b8n:A, 4b8n:C, 4b8n:D
10 3lf5:A 87 72 0.3049 0.2874 0.3472 2.91e-12 3lf5:B
11 1cxy:A 81 80 0.3171 0.3210 0.3250 4.74e-12
12 1kbi:A 504 51 0.2805 0.0456 0.4510 1.94e-11 1fcb:A, 1fcb:B, 1kbi:B, 1kbj:A, 1kbj:B, 3ks0:A, 3ks0:B, 1lco:A, 1lco:B, 1ldc:A, 1ltd:A, 1ltd:B, 2oz0:A, 2oz0:B, 1qcw:A, 1qcw:B, 1sze:A, 1sze:B, 1szf:A, 1szf:B, 1szg:A, 1szg:B
13 1x3x:A 82 66 0.3171 0.3171 0.3939 1.08e-10 1x3x:B
14 8tgb:A 108 76 0.2805 0.2130 0.3026 2.21e-10 8tgb:B
15 7bwh:A 88 84 0.3171 0.2955 0.3095 2.74e-10
16 1sox:A 463 81 0.3537 0.0626 0.3580 4.51e-07 2a9a:A, 2a9a:B, 2a9b:A, 2a9c:A, 2a9c:B, 2a9d:A, 2a9d:B, 3hbp:A, 3hbq:A, 1sox:B
17 1mj4:A 79 73 0.2927 0.3038 0.3288 3.80e-06
18 1k6m:A 432 48 0.1463 0.0278 0.2500 1.3 1c7z:A, 1c7z:B, 1c80:A, 1c80:B, 1c81:A, 1fbt:A, 1fbt:B, 1k6m:B, 1tip:A, 1tip:B
19 5lvf:A 142 24 0.1341 0.0775 0.4583 4.0 2l0i:A, 5m9d:A
20 2d2c:D 168 24 0.1341 0.0655 0.4583 4.1 2d2c:Q, 2e74:D, 2e75:D, 2e76:D, 4h0l:D, 4h13:D, 4i7z:D, 4pv1:D, 1vf5:D, 1vf5:Q
21 4cc5:A 308 48 0.1951 0.0519 0.3333 4.5 4cc6:A, 5fpo:A, 5fpr:A
22 8dyu:A 2562 29 0.1341 0.0043 0.3793 6.0 8dyv:A
23 8fcy:A 2864 29 0.1341 0.0038 0.3793 6.2 8fd6:A, 8fdt:A
24 8pqw:A 2892 29 0.1341 0.0038 0.3793 6.5 8pqy:A, 8pqz:A, 8pqz:J
25 5nug:A 2920 29 0.1341 0.0038 0.3793 6.5 5nug:B
26 7z8g:A 3047 29 0.1341 0.0036 0.3793 7.0 8fdu:A, 7z8l:f
27 3t58:B 504 32 0.1220 0.0198 0.3125 7.6 4p2l:A, 4p2l:B, 3t58:A, 3t58:C, 3t58:D, 3t59:A, 3t59:B, 3t59:C, 3t59:D
28 8ptk:f 4502 29 0.1341 0.0024 0.3793 7.9 8ptk:e
29 1p5j:A 319 27 0.1341 0.0345 0.4074 8.2
30 7z8f:e 4579 29 0.1341 0.0024 0.3793 8.3 5owo:A, 8pr2:f, 8ptk:m, 8ptk:n, 7z8f:f, 7z8f:m, 7z8f:n, 7z8h:A
31 2axn:A 451 50 0.1463 0.0266 0.2400 8.4 5ajv:B, 5ajw:A, 5ajx:A, 5ajy:A, 5ajz:A, 5ak0:A, 4d4j:A, 4d4k:A, 4d4l:A, 4d4m:A, 2dwo:A, 2dwp:A, 6etj:A, 6hvh:A, 6hvi:A, 6hvj:A, 2i1v:B, 6ibx:A, 6iby:A, 6ibz:A, 6ic0:A, 4ma4:A, 3qpu:A, 3qpv:A, 3qpw:A
32 7unj:A 218 18 0.0976 0.0367 0.4444 9.5 7unj:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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