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BioLiP
>protein
ATYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAY
PTSDVVIETHKEEELTGA

The query sequence (length=98) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1gaq:B 98 98 1.0000 1.0000 1.0000 5.90e-68 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
2 1pfd:A 96 95 0.8061 0.8229 0.8316 2.42e-55
3 4zho:A 97 95 0.7755 0.7835 0.8000 8.02e-52 4zho:B
4 1a70:A 97 97 0.7347 0.7423 0.7423 4.21e-50
5 6yac:N 97 97 0.7551 0.7629 0.7629 1.40e-48 6yez:N
6 4zhp:A 98 97 0.7347 0.7347 0.7423 2.46e-48
7 5auk:A 96 95 0.6939 0.7083 0.7158 1.58e-46 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
8 6xtf:D 96 95 0.6531 0.6667 0.6737 2.20e-44 6xtf:C
9 1rfk:B 97 97 0.7245 0.7320 0.7320 7.26e-44 3p63:A, 3p63:B, 1rfk:A
10 1czp:A 98 97 0.7041 0.7041 0.7113 5.57e-43 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
11 1awd:A 94 93 0.6531 0.6809 0.6882 2.53e-42
12 3av8:A 97 96 0.6735 0.6804 0.6875 1.99e-41 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
13 7akt:A 107 93 0.6224 0.5701 0.6559 2.36e-41 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
14 1frr:A 95 93 0.6429 0.6632 0.6774 7.89e-41 1frr:B
15 5h57:A 97 96 0.6531 0.6598 0.6667 1.23e-40 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
16 6khi:1 98 96 0.6327 0.6327 0.6458 9.95e-40 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
17 7y5e:NN 99 97 0.6429 0.6364 0.6495 4.75e-39 7y5e:N2, 7y7a:N7, 7y7a:No
18 3b2g:A 98 96 0.6429 0.6429 0.6562 5.32e-39 3b2g:B
19 3ab5:A 97 95 0.6224 0.6289 0.6421 6.23e-39 3ab5:B, 3wcq:A
20 7s3d:X 97 96 0.6224 0.6289 0.6354 1.82e-38 7s3d:W, 7s3d:x
21 4fxc:A 98 97 0.6429 0.6429 0.6495 1.49e-37
22 1iue:A 98 95 0.5408 0.5408 0.5579 3.90e-35 1iue:B
23 4itk:A 104 93 0.5510 0.5192 0.5806 6.66e-35
24 6iri:A 107 95 0.5204 0.4766 0.5368 2.08e-31
25 1wri:A 93 93 0.5408 0.5699 0.5699 1.31e-30
26 8jc1:A 267 97 0.5918 0.2172 0.5979 1.82e-30 8jc1:B, 8jc1:C, 8jc1:D
27 6vjv:A 96 95 0.4898 0.5000 0.5053 4.21e-29 6vjv:B
28 4n58:A 266 95 0.5204 0.1917 0.5368 6.59e-27 4n58:B, 4n59:A, 4n59:B
29 1frd:A 98 94 0.4898 0.4898 0.5106 6.70e-22
30 1doi:A 128 81 0.3367 0.2578 0.4074 1.34e-12
31 1e0z:A 128 72 0.3061 0.2344 0.4167 5.51e-12 1e10:A
32 1krh:A 337 74 0.2449 0.0712 0.3243 2.73e-08 1krh:B
33 3zyy:X 628 92 0.2755 0.0430 0.2935 3.19e-08 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
34 5ogx:A 333 60 0.2041 0.0601 0.3333 2.18e-05
35 1jq4:A 98 89 0.2653 0.2653 0.2921 2.95e-05
36 2pia:A 321 51 0.1633 0.0498 0.3137 1.63e-04
37 7ylr:A 326 43 0.1735 0.0521 0.3953 0.003
38 7c3b:B 306 54 0.1837 0.0588 0.3333 0.003
39 5frt:E 105 53 0.1735 0.1619 0.3208 0.004 5ffi:E
40 7c3b:C 334 54 0.1837 0.0539 0.3333 0.005 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
41 6icm:D 87 85 0.2245 0.2529 0.2588 0.005
42 5frt:A 119 53 0.1735 0.1429 0.3208 0.005 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
43 6laa:A 753 45 0.1531 0.0199 0.3333 0.015 6gii:A, 6ldl:A
44 4wqm:A 326 62 0.1735 0.0521 0.2742 0.026
45 8iuf:1A 352 45 0.1531 0.0426 0.3333 0.088 8j9h:1A, 8j9i:1A, 8j9j:1A
46 1i7h:A 109 92 0.2551 0.2294 0.2717 0.11 1i7h:B, 1i7h:C
47 7q5y:A 626 41 0.1531 0.0240 0.3659 0.19 7q5y:G, 7q5y:M, 7q5y:S
48 6kbh:A 765 78 0.1837 0.0235 0.2308 0.21
49 8uuq:C 372 49 0.1735 0.0457 0.3469 1.5 9at8:F, 8uuq:G, 8uuq:E, 5yzc:B, 5yzd:C
50 8a5e:A 583 55 0.1531 0.0257 0.2727 2.1 8a5e:D, 7q4v:A, 7q4v:E, 7q4w:A, 7q4w:E
51 6itd:A 328 81 0.2245 0.0671 0.2716 2.9 6k36:A, 6k37:A, 6k38:A
52 7d6v:B 239 41 0.1224 0.0502 0.2927 4.1 7d6x:B
53 3kl9:A 340 34 0.1224 0.0353 0.3529 5.9 3kl9:B, 3kl9:C, 3kl9:D, 3kl9:E, 3kl9:F, 3kl9:G, 3kl9:H, 3kl9:I, 3kl9:J, 3kl9:K, 3kl9:L
54 1nml:A 316 68 0.2041 0.0633 0.2941 6.7 1rz5:A, 1rz6:A
55 4aqt:A 356 38 0.1224 0.0337 0.3158 6.8 8dmk:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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