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BioLiP
>protein
ATYKVTLVTPSGKKEIDCPSDEYILDAAERQGLDLPFSCRAGACSTCAGKMVSGTIDQGDQSFLDDDQIAAGYVLTCVAY
PTSNCSIETHKEDELY

The query sequence (length=96) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6xtf:D 96 96 1.0000 1.0000 1.0000 9.33e-68 6xtf:C
2 1czp:A 98 98 0.7708 0.7551 0.7551 4.88e-50 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
3 5auk:A 96 96 0.7292 0.7292 0.7292 6.10e-50 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
4 1rfk:B 97 97 0.7500 0.7423 0.7423 5.23e-49 3p63:A, 3p63:B, 1rfk:A
5 6khi:1 98 97 0.7396 0.7245 0.7320 6.44e-48 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
6 3av8:A 97 97 0.7604 0.7526 0.7526 9.58e-48 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
7 7akt:A 107 94 0.6875 0.6168 0.7021 2.96e-47 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
8 7s3d:X 97 97 0.7188 0.7113 0.7113 9.28e-47 7s3d:W, 7s3d:x
9 4fxc:A 98 98 0.7604 0.7449 0.7449 1.87e-46
10 3b2g:A 98 97 0.7083 0.6939 0.7010 4.85e-46 3b2g:B
11 6yac:N 97 95 0.6875 0.6804 0.6947 6.54e-46 6yez:N
12 1a70:A 97 95 0.6667 0.6598 0.6737 1.28e-45
13 4zho:A 97 95 0.6458 0.6392 0.6526 3.39e-45 4zho:B
14 1awd:A 94 94 0.6875 0.7021 0.7021 4.80e-45
15 1pfd:A 96 95 0.6562 0.6562 0.6632 1.70e-44
16 1gaq:B 98 95 0.6667 0.6531 0.6737 2.16e-44 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
17 7y5e:NN 99 98 0.7083 0.6869 0.6939 5.29e-44 7y5e:N2, 7y7a:N7, 7y7a:No
18 4zhp:A 98 95 0.6562 0.6429 0.6632 2.18e-43
19 3ab5:A 97 99 0.6667 0.6598 0.6465 6.92e-43 3ab5:B, 3wcq:A
20 5h57:A 97 97 0.6667 0.6598 0.6598 3.79e-41 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
21 1iue:A 98 96 0.5938 0.5816 0.5938 3.82e-41 1iue:B
22 1frr:A 95 94 0.5938 0.6000 0.6064 3.27e-38 1frr:B
23 4itk:A 104 93 0.5833 0.5385 0.6022 4.66e-38
24 6iri:A 107 96 0.5729 0.5140 0.5729 4.11e-35
25 1wri:A 93 93 0.5833 0.6022 0.6022 6.34e-34
26 6vjv:A 96 95 0.5312 0.5312 0.5368 3.94e-33 6vjv:B
27 8jc1:A 267 95 0.5521 0.1985 0.5579 2.23e-29 8jc1:B, 8jc1:C, 8jc1:D
28 4n58:A 266 95 0.5312 0.1917 0.5368 1.25e-27 4n58:B, 4n59:A, 4n59:B
29 1frd:A 98 96 0.5000 0.4898 0.5000 3.02e-23
30 1doi:A 128 64 0.3333 0.2500 0.5000 3.40e-15
31 1e0z:A 128 70 0.3333 0.2500 0.4571 6.64e-15 1e10:A
32 5ogx:A 333 86 0.2708 0.0781 0.3023 7.16e-10
33 1krh:A 337 100 0.3125 0.0890 0.3000 8.64e-09 1krh:B
34 1jq4:A 98 89 0.3333 0.3265 0.3596 1.43e-08
35 3zyy:X 628 87 0.3021 0.0462 0.3333 2.15e-06 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
36 7c3b:B 306 45 0.1562 0.0490 0.3333 1.88e-04
37 2pia:A 321 67 0.1875 0.0561 0.2687 2.07e-04
38 7c3b:C 334 45 0.1562 0.0449 0.3333 2.72e-04 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
39 7ylr:A 326 61 0.1771 0.0521 0.2787 6.14e-04
40 4wqm:A 326 71 0.1979 0.0583 0.2676 0.003
41 6laa:A 753 45 0.1250 0.0159 0.2667 0.011 6gii:A, 6ldl:A
42 6icm:D 87 56 0.1458 0.1609 0.2500 0.019
43 6kbh:A 765 60 0.1458 0.0183 0.2333 0.022
44 1i7h:A 109 76 0.2500 0.2202 0.3158 0.052 1i7h:B, 1i7h:C
45 5frt:E 105 28 0.1042 0.0952 0.3571 0.20 5ffi:E
46 5frt:A 119 53 0.1667 0.1345 0.3019 0.25 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
47 2vhd:A 323 45 0.1562 0.0464 0.3333 0.67 1eb7:A, 2vhd:B
48 7awt:G 907 50 0.1667 0.0176 0.3200 1.1 7nyr:G, 7nyu:G, 7nyv:G, 7nz1:G, 7p61:G, 7p62:G, 7p63:G, 7p64:G, 7p69:G, 7p7c:G, 7p7e:G, 7p7j:G, 7p7k:G, 7p7l:G, 7p7m:G, 7z7r:G, 7z7s:G, 7z7t:G, 7z7v:G, 7z80:G, 7z83:G, 7z84:G, 7zc5:G, 7zci:G
49 7q5y:A 626 39 0.1354 0.0208 0.3333 1.3 7q5y:G, 7q5y:M, 7q5y:S
50 2y5c:A 107 48 0.1771 0.1589 0.3542 1.3 2y5c:B
51 2bs2:B 239 22 0.1146 0.0460 0.5000 1.5 2bs2:E, 2bs3:B, 2bs3:E, 2bs4:B, 2bs4:E, 1e7p:B, 1e7p:E, 1e7p:H, 1e7p:K, 1qlb:B, 1qlb:E
52 5uj5:A 132 25 0.1250 0.0909 0.4800 3.0
53 8iuf:1A 352 45 0.1458 0.0398 0.3111 3.8 8j9h:1A, 8j9i:1A, 8j9j:1A
54 4hea:3 756 38 0.1146 0.0146 0.2895 9.3 2fug:3, 2fug:C, 2fug:L, 2fug:U, 4hea:D, 6i0d:3, 6i0d:D, 6i1p:3, 6i1p:D, 3i9v:3, 3i9v:C, 3iam:3, 3iam:C, 3ias:3, 3ias:C, 3ias:L, 3ias:U, 3m9s:3, 3m9s:C, 6q8o:3, 6q8o:D, 6q8w:3, 6q8w:D, 6q8x:3, 6q8x:D, 6y11:3, 6y11:D, 2ybb:3, 6ziy:3, 6zjl:3, 6zjn:3, 6zjy:3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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