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BioLiP
>protein
ATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDY

The query sequence (length=36) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6ff4:t 172 36 1.0000 0.2093 1.0000 1.13e-21 8ch6:Z, 6ff7:t, 7qtt:Z
2 7dvq:M 191 36 1.0000 0.1885 1.0000 1.57e-21 8i0r:K, 8i0s:K, 8i0t:K, 5z56:M, 5z58:M
3 7dco:M 176 36 0.6944 0.1420 0.6944 1.24e-14 5gm6:a
4 1m9o:A 40 30 0.3056 0.2750 0.3667 5.04e-04
5 1rgo:A 70 31 0.2778 0.1429 0.3226 0.004
6 1rgo:A 70 25 0.2500 0.1286 0.3600 0.006
7 5elh:A 142 29 0.4167 0.1056 0.5172 0.026 5elh:B
8 7k95:A 53 25 0.3611 0.2453 0.5200 0.054 7zyh:A, 7zyh:D, 7zyh:G, 7zyh:J
9 6pmg:X 35 27 0.3056 0.3143 0.4074 0.070
10 6nzl:A 78 25 0.2500 0.1154 0.3600 0.14
11 6nzl:A 78 29 0.2778 0.1282 0.3448 0.25
12 8y6o:V 101 20 0.2500 0.0891 0.4500 0.85
13 2cqe:A 98 21 0.3333 0.1224 0.5714 0.95
14 2cqe:A 98 22 0.2500 0.0918 0.4091 9.3
15 6uej:A 212 25 0.2778 0.0472 0.4000 1.6 6uei:A
16 3u9g:A 217 28 0.3333 0.0553 0.4286 1.7 6l1w:A
17 8pj1:s 159 16 0.2500 0.0566 0.5625 1.8 7a09:4, 8oz0:U, 8ppl:Is, 7qp6:s, 6ybv:s, 6zmw:s, 6zp4:4
18 6fdz:U 265 28 0.3056 0.0415 0.3929 2.2 6fdy:U
19 2x7k:A 164 25 0.2222 0.0488 0.3200 2.8
20 4izg:A 369 23 0.1944 0.0190 0.3043 4.6 4e8g:A, 4e8g:B, 4izg:B, 4j1o:A, 4j1o:B
21 2fc6:A 50 25 0.2500 0.1800 0.3600 4.7
22 2d9n:A 77 22 0.2778 0.1299 0.4545 5.7 2rhk:C
23 7aor:aa 1558 24 0.2778 0.0064 0.4167 5.7
24 2d9m:A 69 26 0.3056 0.1594 0.4231 5.7
25 2uuu:A 550 17 0.2222 0.0145 0.4706 6.6 2uuu:B, 2uuu:C, 2uuu:D, 2uuv:A, 2uuv:B, 2uuv:C, 2uuv:D
26 6dnh:C 117 22 0.2778 0.0855 0.4545 7.2 8e3i:C, 8e3q:C, 6fuw:C, 8r8r:C, 2rhk:D, 6urg:C, 6uro:C
27 4cs7:C 172 21 0.2778 0.0581 0.4762 7.6 4cs7:A, 4cs7:B, 4cs7:E, 4cs8:A, 4cs8:B, 4cs8:C, 4cs8:E, 4cs9:A, 4cs9:B, 4cs9:C, 4cs9:E, 4csa:C, 4csa:A, 4csa:B, 4csa:E
28 7pyt:B 392 18 0.2500 0.0230 0.5000 8.5 7pyt:D, 7yxm:B, 7yxm:D
29 7n7r:B 348 27 0.2778 0.0287 0.3704 9.3 7k0r:A, 7k0r:B, 7k0r:C, 7k0r:D, 7k0r:E, 7k0r:F, 7k1l:A, 7k1l:B, 7k1o:A, 7k1o:B, 7k1o:C, 7n06:A, 7n06:B, 7n06:C, 7n06:D, 7n06:E, 7n06:F, 7n33:A, 7n33:B, 7n33:C, 7n33:D, 7n33:E, 7n33:F, 7n7u:A, 7n7u:B, 7n7w:B, 7n7y:A, 7n7y:B, 7n83:A, 7n83:B, 5s6x:A, 5s6x:B, 5s6y:A, 5s6y:B, 5s6z:A, 5s6z:B, 5s71:B, 5s72:A, 5sa4:B, 5sa5:B, 5sa6:A, 5sa6:B, 5sa7:A, 5sa8:A, 5sa8:B, 5sa9:B, 5saa:A, 5saa:B, 5sab:B, 5sac:B, 5sad:B, 5sae:A, 5sae:B, 5saf:A, 5saf:B, 5sag:B, 5sah:A, 5sah:B, 5sai:B, 7tj2:A, 7tj2:E, 7tqv:A, 7tqv:C, 7tqv:E, 8ud3:B, 8ud3:A, 8ud4:B, 8ud4:A, 8ud5:D, 8ud5:B, 8ud5:A, 6vww:A, 6wlc:A, 6wlc:B, 6wxc:A, 6wxc:B, 6x1b:A, 6x1b:B, 6x4i:A, 6x4i:B
30 3ef1:A 372 21 0.2222 0.0215 0.3810 9.3 3ef0:A, 4xpz:A, 4xq0:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417