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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ASYQVRLINKKQDIDTTIEIDEETTILDGAEENGIELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCV
TYPRSNCTIKTHQEPYLA

The query sequence (length=98) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1frd:A 98 98 1.0000 1.0000 1.0000 7.22e-70
2 7y5e:NN 99 97 0.5714 0.5657 0.5773 4.31e-39 7y5e:N2, 7y7a:N7, 7y7a:No
3 7s3d:X 97 96 0.5510 0.5567 0.5625 2.45e-38 7s3d:W, 7s3d:x
4 4fxc:A 98 97 0.5510 0.5510 0.5567 1.36e-37
5 3ab5:A 97 95 0.5408 0.5464 0.5579 1.46e-37 3ab5:B, 3wcq:A
6 3b2g:A 98 93 0.5408 0.5408 0.5699 9.39e-37 3b2g:B
7 1rfk:B 97 97 0.5306 0.5361 0.5361 3.51e-36 3p63:A, 3p63:B, 1rfk:A
8 6khi:1 98 97 0.5714 0.5714 0.5773 1.66e-35 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
9 1awd:A 94 95 0.6020 0.6277 0.6211 2.44e-35
10 4zho:A 97 94 0.5408 0.5464 0.5638 2.69e-35 4zho:B
11 7akt:A 107 95 0.5918 0.5421 0.6105 7.12e-35 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
12 5auk:A 96 94 0.5306 0.5417 0.5532 3.71e-34 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
13 1czp:A 98 94 0.5000 0.5000 0.5213 2.00e-32 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
14 1pfd:A 96 94 0.5000 0.5104 0.5213 4.24e-31
15 6yac:N 97 94 0.5510 0.5567 0.5745 7.55e-31 6yez:N
16 1gaq:B 98 97 0.5000 0.5000 0.5052 1.43e-30 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
17 6xtf:D 96 96 0.4898 0.5000 0.5000 2.64e-30 6xtf:C
18 6iri:A 107 95 0.4388 0.4019 0.4526 4.55e-30
19 4zhp:A 98 94 0.5204 0.5204 0.5426 1.56e-29
20 3av8:A 97 95 0.5000 0.5052 0.5158 6.63e-29 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
21 1iue:A 98 97 0.4796 0.4796 0.4845 8.04e-29 1iue:B
22 1frr:A 95 92 0.4796 0.4947 0.5109 1.77e-28 1frr:B
23 5h57:A 97 94 0.4490 0.4536 0.4681 8.40e-28 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
24 1a70:A 97 97 0.4490 0.4536 0.4536 4.63e-27
25 4itk:A 104 81 0.4286 0.4038 0.5185 2.88e-25
26 6vjv:A 96 81 0.3878 0.3958 0.4691 7.27e-25 6vjv:B
27 8jc1:A 267 90 0.4694 0.1723 0.5111 2.02e-23 8jc1:B, 8jc1:C, 8jc1:D
28 1wri:A 93 96 0.4184 0.4409 0.4271 9.47e-22
29 4n58:A 266 94 0.4184 0.1541 0.4362 1.47e-19 4n58:B, 4n59:A, 4n59:B
30 1doi:A 128 71 0.2653 0.2031 0.3662 1.48e-11
31 1e0z:A 128 71 0.2857 0.2188 0.3944 2.50e-11 1e10:A
32 2pia:A 321 70 0.2347 0.0717 0.3286 6.38e-08
33 5ogx:A 333 76 0.2143 0.0631 0.2763 7.53e-07
34 5frt:E 105 49 0.1633 0.1524 0.3265 3.14e-06 5ffi:E
35 5frt:A 119 49 0.1633 0.1345 0.3265 4.75e-06 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
36 3zyy:X 628 74 0.2245 0.0350 0.2973 6.09e-06 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
37 6laa:A 753 69 0.2041 0.0266 0.2899 1.02e-05 6gii:A, 6ldl:A
38 4wqm:A 326 83 0.2551 0.0767 0.3012 3.18e-05
39 7ylr:A 326 57 0.1837 0.0552 0.3158 3.97e-05
40 6icm:D 87 63 0.1633 0.1839 0.2540 3.95e-04
41 6kbh:A 765 70 0.1735 0.0222 0.2429 7.91e-04
42 8qby:G 666 48 0.1837 0.0270 0.3750 0.001
43 7c3b:B 306 36 0.1531 0.0490 0.4167 0.002
44 7c3b:C 334 36 0.1531 0.0449 0.4167 0.002 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
45 7q5y:A 626 42 0.1633 0.0256 0.3810 0.006 7q5y:G, 7q5y:M, 7q5y:S
46 1jq4:A 98 73 0.2347 0.2347 0.3151 0.009
47 1i7h:A 109 63 0.2041 0.1835 0.3175 0.050 1i7h:B, 1i7h:C
48 8oh5:C 1172 35 0.1633 0.0137 0.4571 0.070 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
49 8esz:S1 683 45 0.1327 0.0190 0.2889 0.88 8b9z:G, 8ba0:G, 8esw:S1
50 8a5e:A 583 52 0.1429 0.0240 0.2692 1.4 8a5e:D, 7q4v:A, 7q4v:E, 7q4w:A, 7q4w:E
51 4fn5:A 670 29 0.1122 0.0164 0.3793 1.5
52 5ljx:A 382 27 0.1224 0.0314 0.4444 1.8 5lk2:A, 5lk3:A
53 8a6t:A 571 47 0.1531 0.0263 0.3191 1.9 8a6t:D, 8bew:A, 8bew:D
54 8ro4:A 339 21 0.1122 0.0324 0.5238 2.1 8ro4:C, 8ro4:D, 8ro4:B, 8ro4:E, 8ro4:F
55 5uj5:A 132 54 0.1735 0.1288 0.3148 2.5
56 2i2x:B 258 16 0.0816 0.0310 0.5000 2.9 2i2x:D, 2i2x:F, 2i2x:H, 2i2x:J, 2i2x:L, 2i2x:N, 2i2x:P
57 4xdd:A 582 32 0.1224 0.0206 0.3750 2.9 8aio:A, 8aio:B, 8aj6:A, 8aj6:B, 8aln:A, 8aln:B, 8ap2:A, 8ap2:B, 5byq:A, 5byq:B, 5byr:A, 5byr:B, 5bys:A, 5bys:B, 1c4a:A, 1c4c:A, 3c8y:A, 8cjy:A, 8cjy:B, 1feh:A, 6gly:A, 6gly:B, 6glz:A, 6glz:B, 6gm0:A, 6gm0:B, 6gm1:A, 6gm1:B, 6gm2:A, 6gm2:B, 6gm3:A, 6gm3:B, 6gm4:A, 6gm4:B, 6gm8:A, 6gm8:B, 6h63:A, 6h63:B, 5la3:A, 5la3:B, 6n59:A, 6n6p:A, 6nac:A, 5oef:A, 5oef:B, 8pvm:A, 8pvm:B, 7qhf:A, 7qhf:B, 8qm3:A, 8qm3:B, 4xdc:A, 4xdc:B, 4xdd:B, 6yf4:A, 6yf4:B
58 4kwh:B 257 60 0.1735 0.0661 0.2833 3.0 4kwh:A, 4kwi:A, 4kwi:B, 4oso:A, 4oso:B
59 5gsm:A 786 30 0.1531 0.0191 0.5000 3.6 5gsm:B
60 8gym:s1 689 41 0.1224 0.0174 0.2927 4.0 8b6f:AB, 8bqs:AB, 8gym:S1, 8gzu:s1, 8gzu:S1, 7tgh:S1
61 2bwa:A 226 62 0.2041 0.0885 0.3226 4.4 2bwa:B, 2bwc:A, 2bwc:B, 1h0b:A, 1h0b:B
62 3ejx:D 301 29 0.1020 0.0332 0.3448 5.8 3ejx:A, 3ejx:B, 3ejx:C, 3ejx:E, 3ejx:F, 3ekm:A, 3ekm:B, 3ekm:C, 3ekm:D, 3ekm:E, 3ekm:F
63 1efg:A 592 28 0.0918 0.0152 0.3214 5.9 2efg:A
64 7nsh:BC 700 28 0.1122 0.0157 0.3929 6.1 7l20:w
65 5hau:1z 730 28 0.0918 0.0123 0.3214 6.2 2bm0:A, 2bm1:A, 1fnm:A, 6gzq:H1, 6gzx:H1, 6gzx:H2, 6gzz:H1, 6gzz:H2, 5hau:2z, 4m1k:A, 4myt:A, 4myu:A, 2om7:L, 5ot7:U, 6q95:G, 6ucq:1v, 6ucq:2v, 4v5f:AY, 4v5f:CY, 4v5m:AY, 4v5n:AY, 4v6t:AY, 4v8u:AY, 4v8u:CY, 4v90:AY, 4v9j:AY, 4v9j:CY, 4v9k:AY, 4v9k:CY, 4v9l:AY, 4v9l:CY, 4v9m:AY, 4v9m:CY, 4w29:AY, 4w29:CY, 4wpo:BZ, 4wpo:DZ, 4wqf:BZ, 4wqf:DZ, 4wqu:BZ, 4wqu:DZ, 4wqy:BZ, 4wqy:DZ
66 2bv3:A 632 28 0.0918 0.0142 0.3214 6.4 1dar:A
67 4v9h:AY 622 28 0.0918 0.0145 0.3214 6.9
68 7pjx:x 522 28 0.0918 0.0172 0.3214 7.3
69 7n2v:EF 704 28 0.0918 0.0128 0.3214 7.4 3j9z:S1, 3ja1:S3, 7k51:8, 7k52:8, 7k54:8, 7k55:8, 7n2c:EF, 7otc:w, 7pjv:x, 7pjw:x, 7pjy:x, 7pjz:x, 7ss9:8, 7ssd:8, 7ssl:8, 7st7:8, 7ug7:EF, 4v7b:AY, 4v7d:BZ, 4v9o:BV, 4v9o:DV, 4v9o:FV, 4v9o:HV, 4v9p:BV, 4v9p:DV, 4v9p:FV, 4v9p:HV
70 6def:C 368 54 0.1837 0.0489 0.3333 8.0 6def:A, 6def:B, 6def:D, 6di7:A, 6djq:A, 6djq:C, 6djq:D, 6vjf:A, 6vjf:B, 6vjf:C, 6vjf:D
71 2dwu:B 266 49 0.1837 0.0677 0.3673 9.5 2dwu:A, 2dwu:C
72 7qso:G 700 43 0.1020 0.0143 0.2326 9.6 7ak5:G, 7ak6:G, 7b93:G, 8c2s:G, 8ca3:G, 8ca4:G, 8ca5:G, 7dgq:A, 7dgr:A, 7dgs:A, 7dgz:A, 7dh0:A, 7dkf:A2, 6g2j:G, 6g72:G, 5gpn:Y, 5gup:G, 8iao:G, 8iap:G, 8ib4:G, 8ib5:G, 8ib9:G, 8iba:G, 8ibd:G, 8ibe:G, 8ic2:G, 8ic3:G, 5lnk:3, 5o31:G, 8olt:G, 8om1:G, 7psa:G, 8pw5:3, 8pw6:3, 8pw7:3, 8q0a:G, 8q0f:G, 8q0j:G, 8q0m:G, 8q0o:G, 8q0q:G, 8q1p:G, 8q1u:G, 8q1y:G, 8q25:G, 8q45:G, 8q46:G, 8q47:G, 8q48:G, 8q49:G, 8q4a:G, 6q9d:S1, 6qa9:S1, 6qbx:S1, 6qc2:S1, 6qc3:S1, 6qc4:S1, 6qc5:S1, 6qc6:S1, 6qc7:S1, 6qc8:S1, 6qc9:S1, 6qca:S1, 6qcf:S1, 7qsd:G, 7qsk:G, 7qsl:G, 7qsm:G, 7qsn:G, 7r41:G, 7r42:G, 7r43:G, 7r44:G, 7r45:G, 7r46:G, 7r47:G, 7r48:G, 7r4c:G, 7r4d:G, 7r4f:G, 7r4g:G, 8rgp:3, 8rgq:3, 8rgr:3, 8rgt:3, 8ud1:1G, 8ueo:1G, 8uep:1G, 8ueq:1G, 8uer:1G, 8ues:1G, 8uet:1G, 8ueu:1G, 8uev:1G, 8uew:1G, 8uex:1G, 8uey:1G, 8uez:1G, 8ugh:1G, 8ugi:1G, 8ugj:1G, 8ugn:1G, 8ugn:5G, 8ugr:1G, 8ugr:5G, 7v2c:M, 7v2d:M, 7v2e:M, 7v2f:M, 7v2h:M, 7v2k:M, 7v2r:M, 7v30:M, 7v31:M, 7v32:M, 7v33:M, 7v3m:M, 7vb7:M, 7vbn:M, 7vbz:M, 7vwj:M, 7vxp:M, 7vxu:M, 7vy8:M, 7vya:M, 7vyf:M, 7vyh:M, 7vyn:M, 7vz1:M, 7vzv:M, 7vzw:M, 7w00:M, 7w0h:M, 7w0r:M, 7w0y:M, 7w1o:M, 7w1p:M, 7w1t:M, 7w1u:M, 7w1v:M, 7w1z:M, 7w20:M, 7w2k:M, 7w2l:M, 7w2r:M, 7w2u:M, 7w2y:M, 7w31:M, 7w32:M, 7w35:M, 7w4c:M, 7w4d:M, 7w4e:M, 7w4f:M, 7w4g:M, 7w4j:M, 7w4k:M, 7w4l:M, 7w4m:M, 7w4n:M, 7w4q:M, 5xtb:M, 5xtd:M, 5xth:M, 5xti:M, 5xti:BM, 7zd6:3, 7zdh:3, 7zdj:3, 7zdm:3, 7zdp:3, 7zeb:3, 6zk9:3, 6zkc:3, 6zkd:3, 6zke:3, 6zkf:3, 6zkg:3, 6zkh:3, 6zki:3, 6zkj:3, 6zkk:3, 6zkl:3, 6zkm:3, 6zkn:3, 6zko:3, 6zkp:3, 6zkq:3, 6zkr:3, 6zks:3, 6zkt:3, 6zku:3, 6zkv:3, 6zr2:G, 6ztq:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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