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BioLiP
>protein
ASFLKEAFRVHICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTDRS

The query sequence (length=71) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5c4j:B 1157 78 1.0000 0.0614 0.9103 5.03e-45 4a3b:B, 4a3c:B, 4a3d:B, 4a3e:B, 4a3f:B, 4a3g:B, 4a3i:B, 4a3j:B, 4a3k:B, 4a3l:B, 4a3m:B, 4a93:B, 2b63:B, 2b8k:B, 6blo:B, 6blp:B, 6bm2:B, 6bm4:B, 6bqf:B, 4by1:B, 4by7:B, 2e2j:B, 3gtl:B, 3gtm:B, 3gto:B, 3gtp:B, 3gtq:B, 3h3v:C, 3hou:B, 3hou:N, 3hov:B, 3how:B, 3hox:B, 3hoy:B, 3hoz:B, 6i84:B, 3j0k:B, 2ja5:B, 2ja6:B, 2ja7:B, 2ja7:N, 2ja8:B, 7ked:B, 7kee:B, 7kef:B, 3m3y:B, 3m4o:B, 7ml4:B, 7nkx:B, 7nky:B, 2nvq:B, 2nvt:B, 2nvx:B, 5ot2:B, 3po3:B, 3qt1:B, 2r7z:B, 1r9t:B, 2r92:B, 2r93:B, 7riq:B, 7riw:B, 7rix:B, 7riy:B, 3rzd:B, 3rzo:B, 3s14:B, 3s15:B, 3s16:B, 3s17:B, 3s1m:B, 3s1n:B, 3s1q:B, 3s1r:B, 3s2d:B, 3s2h:B, 1sfo:B, 8ukq:B, 8ukr:B, 8uks:B, 8ukt:B, 8uku:B, 6upx:B, 6upz:B, 6uq0:B, 6uq1:B, 6uq2:B, 6uq3:B, 2vum:B, 4x67:B, 4x6a:B, 1y1v:B, 1y1w:B, 4y52:B, 1y77:B, 4y7n:B
2 6o6c:B 1165 78 1.0000 0.0609 0.9103 5.03e-45 5c44:B, 2e2h:B, 9ja1:B, 2nvz:B, 6upy:B, 2yu9:B
3 8cen:B 1180 78 1.0000 0.0602 0.9103 5.03e-45 4bbr:B, 4bbs:B, 5c3e:B, 5c4a:B, 5c4x:B, 8ceo:B, 2e2i:B, 3fki:B, 5fmf:B, 5fyw:B, 5fz5:B, 6gyk:B, 6gyl:B, 6gym:B, 3i4m:B, 3i4n:B, 5ip7:B, 5ip9:B, 3k1f:B, 7mei:b, 7mei:B, 7mk9:B, 7mka:b, 7ml0:B, 7ml1:B, 7ml2:B, 7o4i:B, 7o4j:B, 7o72:B, 7o73:B, 7o75:B, 5oqj:B, 5oqm:B, 3po2:B, 7rim:B, 7rip:B, 5sva:B, 4v1m:B, 4v1n:B, 4v1o:B, 7zs9:B, 7zsa:B, 7zsb:B
4 8tvy:B 1207 78 1.0000 0.0588 0.9103 5.03e-45 3gtg:B, 3gtj:B, 3gtk:B, 8jch:B, 8k5p:B, 7o4k:B, 7o4l:B, 5u5q:B, 5vvr:B, 5vvs:B
5 3k7a:B 1122 78 1.0000 0.0633 0.9103 2.17e-43
6 4bxx:B 1097 78 1.0000 0.0647 0.9103 2.30e-43 4bxz:B, 3cqz:B, 1i3q:B, 1i50:B, 1i6h:B, 1k83:B, 1nik:B, 2nvy:B, 1r5u:B, 1r9s:B, 1twa:B, 1twc:B, 1twf:B, 1twg:B, 1twh:B, 5w4u:B, 5w51:B, 1wcm:B
7 8u9r:B 1060 78 1.0000 0.0670 0.9103 2.66e-43 8u9x:B
8 8tug:B 1041 78 1.0000 0.0682 0.9103 3.04e-43 8tvp:B, 8tvq:B, 8tvs:B, 8tvv:B, 8tvw:B, 8tvx:B
9 5x4z:N 1074 77 0.8028 0.0531 0.7403 6.65e-36 5x4z:B, 5x51:B, 5x51:N
10 7xn7:B 1164 78 0.8028 0.0490 0.7308 9.08e-36 6a5l:B, 6a5o:B, 6a5p:B, 6a5r:B, 6a5t:B, 6a5u:B, 8h0v:B, 8h0w:B, 8he5:B, 6inq:B, 6ir9:B, 6j4w:B, 6j4x:B, 6j4y:B, 6j4z:B, 6j50:B, 6j51:B, 8jh2:B, 8jh3:B, 8jh4:B, 7wbv:B, 7wbw:B, 7wbx:B, 5xog:B, 5xon:B, 7xse:B, 7xsx:B, 7xsz:B, 7xt7:B, 7xtd:B, 7xti:B, 8yfq:B, 8yfr:B
11 3h0g:B 1150 63 0.4789 0.0296 0.5397 3.65e-20 3h0g:N
12 5iy6:B 1165 75 0.4789 0.0292 0.4533 3.96e-18 8a40:B, 7b0y:B, 8b3d:B, 8b3f:B, 8bvw:B, 8byq:B, 8bz1:B, 7edx:p, 7eg7:p, 7eg8:p, 7eg9:p, 7ega:p, 7egb:p, 7egc:p, 7ena:PB, 7enc:PB, 6exv:B, 5flm:B, 8gxq:PB, 8gxs:PB, 5iy7:B, 5iy8:B, 5iy9:B, 5iya:B, 5iyb:B, 5iyc:B, 5iyd:B, 7lbm:B, 7nvr:B, 7nvs:B, 7nvt:B, 7nvu:B, 7nvy:B, 7nvz:B, 7nw0:B, 8oeu:B, 8oev:B, 8oew:B, 8of0:B, 5oik:B, 7okx:B, 7oky:B, 7ol0:B, 7oo3:B, 7oob:B, 7oop:B, 7opc:B, 7opd:B, 8p4f:B, 8s52:B, 8s54:B, 8s55:B, 8uha:B, 8uhd:B, 8uhg:B, 8ui0:B, 8uis:B, 8w8e:B, 8w8f:B, 8wak:p, 8wal:p, 8wan:p, 8wao:p, 8wap:p, 8waq:p, 8war:p, 8was:p, 8wat:p, 8wau:p, 8wav:p, 8waw:p, 8wax:p, 8way:p, 8waz:p, 8wb0:p, 7zwd:B, 7zx7:B, 7zx8:B
13 6gmh:B 1132 75 0.4648 0.0292 0.4400 6.25e-17 8a3y:B, 6gml:B, 8p4a:B, 8p4b:B, 8p4c:B, 8p4d:B, 8p4e:B, 7pks:B, 8rbx:B, 8s51:B, 8s5n:B, 6ted:B, 7unc:B, 7und:B, 7ycx:2
14 6cnb:B 1114 61 0.4085 0.0260 0.4754 1.90e-11 8bws:B, 6cnc:B, 6cnd:B, 6cnf:B, 6eu0:B, 6eu1:B, 6f40:B, 6f41:B, 6f42:B, 6f44:B, 5fj8:B, 5fja:B, 6tut:B, 7z0h:B, 7z1l:B, 7z1m:B, 7z1n:B, 7z1o:B, 7z2z:B, 7z30:B, 7z31:B
15 8ity:B 1105 61 0.3944 0.0253 0.4590 6.07e-11 7a6h:B, 7ae1:B, 7ae3:B, 7aea:B, 7d58:B, 7d59:B, 7fji:B, 7fjj:B, 8iue:B, 8iuh:B
16 7dn3:B 1044 61 0.3944 0.0268 0.4590 4.59e-10 7du2:B
17 4ayb:B 1103 57 0.3099 0.0199 0.3860 1.48e-07 3hkz:B, 3hkz:J, 2pmz:B, 2pmz:R, 4v8s:AR, 4v8s:BB, 2waq:B, 2wb1:B, 2wb1:R, 2y0s:B, 2y0s:R
18 7ok0:B 1109 57 0.3099 0.0198 0.3860 4.88e-06 7oq4:B, 7oqy:B
19 8xmc:B 1082 60 0.2958 0.0194 0.3500 1.71e-05 7eu1:B, 8xmb:B
20 8xmd:B 1061 60 0.2958 0.0198 0.3500 1.87e-05 7eu0:B, 8hyj:B, 8xme:B
21 3qqc:A 381 57 0.2817 0.0525 0.3509 0.002
22 8oki:B 1101 57 0.2817 0.0182 0.3509 0.002 8cro:B, 8orq:B, 8p2i:B, 8rbo:B
23 7obb:B 1130 65 0.2535 0.0159 0.2769 0.020 7ob9:B, 7oba:B, 7vba:B, 7vbb:B, 7vbc:B
24 8q3b:B 1104 63 0.2254 0.0145 0.2540 0.95
25 1n04:A 683 29 0.1268 0.0132 0.3103 2.5 2d3i:A, 8fei:A, 1iej:A, 1iq7:A, 1nft:A, 1nnt:A, 1ovt:A, 8x3h:A
26 8q3k:B 1020 63 0.2254 0.0157 0.2540 3.9
27 4nqa:H 319 29 0.1408 0.0313 0.3448 5.3 6a5y:D, 6a5z:D, 6a5z:L, 6a60:D, 7a77:A, 7a78:A, 7a79:A, 7a79:B, 3a9e:A, 2acl:A, 2acl:C, 2acl:E, 2acl:G, 7aos:A, 7b88:A, 7b9o:A, 7bk4:A, 7bk4:C, 1by4:A, 1by4:B, 1by4:C, 1by4:D, 7cfo:A, 7cfo:B, 7cfo:D, 7cfo:C, 4cn2:C, 4cn2:D, 4cn3:A, 4cn3:D, 4cn3:B, 4cn3:C, 4cn5:A, 4cn5:B, 4cn7:A, 4cn7:B, 4cn7:E, 4cn7:F, 1dsz:B, 3dzy:A, 3e94:A, 5ec9:A, 3fal:A, 3fal:C, 1fby:A, 1fby:B, 6fbq:A, 6fbq:B, 6fbr:A, 6fbr:B, 3fc6:A, 3fc6:C, 1fm6:A, 1fm6:U, 1fm9:A, 3fug:A, 1g5y:B, 1g5y:C, 3h0a:A, 1h9u:A, 1h9u:B, 1h9u:C, 1h9u:D, 8hbm:A, 8hbm:E, 6hn6:A, 8j54:C, 8j54:D, 8j54:E, 8j54:F, 5ji0:A, 6jno:A, 6jno:D, 6jnr:A, 6jnr:B, 4k4j:A, 4k6i:A, 1k74:A, 3kwy:A, 6l6k:A, 6lb4:A, 6lb5:A, 6lb5:C, 6lb6:A, 5lyq:A, 4m8e:A, 4m8h:A, 5mj5:A, 5mk4:A, 5mk4:C, 5mkj:A, 5mku:A, 5mmw:A, 1mv9:A, 1mvc:A, 1mzn:A, 1mzn:C, 1mzn:E, 1mzn:G, 4n5g:A, 4n5g:D, 4n8r:A, 4n8r:D, 7nke:A, 7nke:C, 2nll:A, 4nqa:A, 3nsq:B, 3oap:A, 4oc7:A, 3ozj:A, 3ozj:C, 2p1t:A, 2p1u:A, 2p1v:A, 3pcu:A, 7pdq:A, 7pdt:A, 7pdt:B, 4poh:A, 4poj:A, 4pp3:A, 4pp5:A, 8pp0:A, 1r0n:A, 3r29:A, 3r29:B, 3r2a:B, 3r2a:D, 3r2a:A, 3r2a:C, 3r5m:A, 3r5m:C, 1rdt:A, 4rfw:A, 4rmc:A, 4rmd:A, 4rme:A, 1rxr:A, 6sjm:A, 6sti:A, 5tbp:A, 5tbp:C, 5tbp:B, 5tbp:D, 1uhl:A, 3uvv:B, 7uw2:A, 7uw4:A, 1xdk:A, 1xdk:E, 1xls:A, 1xls:B, 1xls:C, 1xls:D, 1xv9:A, 1xv9:C, 1xvp:A, 1xvp:C, 6xwg:C, 6xwh:C, 6xwh:D, 1ynw:B, 5z12:C, 5z12:B, 5zqu:A, 5zqu:C, 5zqu:B, 5zqu:D, 4zsh:A, 2zxz:A, 2zy0:A, 2zy0:C
28 8sij:A 445 45 0.1831 0.0292 0.2889 7.6 8sij:B
29 4v7e:Bf 71 21 0.1268 0.1268 0.4286 8.6 8auv:N, 8b2l:N1, 8r57:f
30 1jnf:A 674 24 0.1549 0.0163 0.4583 8.9 1suv:E, 1suv:F, 1tfd:A
31 2cs2:A 134 42 0.1690 0.0896 0.2857 9.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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