BioLiP

>protein
AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLF
GRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRK
GGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRALDRERIDLLWKIARAGARSAV
GTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEY
IGQQRGEGYVFYENRAYGVAGKSLFDDGLGA

The query sequence (length=351) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1zot:A	351	351	1.0000	1.0000	1.0000	0.0	2col:A
2	1sk6:A	481	362	0.3162	0.2308	0.3066	1.66e-35	1k90:B, 1pk0:B, 1s26:B
3	1xfu:A	735	362	0.3162	0.1510	0.3066	8.76e-35	1k90:A, 1k90:C, 1lvc:A, 1lvc:C, 1pk0:A, 1pk0:C, 1s26:A, 1s26:C, 1sk6:C, 1xfu:B, 1xfu:C, 1xfu:D, 1xfu:E, 1xfu:F, 1xfv:A, 1xfv:B, 1xfv:C, 1xfv:D, 1xfv:E, 1xfv:F, 1xfw:A, 1xfw:B, 1xfw:C, 1xfw:D, 1xfw:E, 1xfw:F, 1xfx:A, 1xfx:B, 1xfx:C, 1xfx:D, 1xfx:E, 1xfx:F, 1xfy:A, 1xfy:B, 1xfy:C, 1xfy:D, 1xfy:E, 1xfy:F, 1xfz:A, 1xfz:B, 1xfz:C, 1xfz:D, 1xfz:E, 1xfz:F, 1y0v:A, 1y0v:B, 1y0v:C, 1y0v:D, 1y0v:E, 1y0v:F
4	1sk6:B	454	360	0.3134	0.2423	0.3056	8.95e-35
5	7p1g:M	347	189	0.1909	0.1931	0.3545	4.04e-20	7p1g:K, 7p1g:L, 7p1g:N, 7p1g:O
6	8bo1:B	398	303	0.2137	0.1884	0.2475	9.72e-13	8bo1:D, 8br0:B, 8br0:D, 8br1:B, 8br1:D
7	5ixg:B	169	87	0.0826	0.1716	0.3333	1.5	5ixg:C, 5ixg:A, 5ixg:D
8	4wut:A	290	50	0.0399	0.0483	0.2800	7.1

[Back]