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BioLiP
>protein
AGSQWRLQQGFAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEE
EGKQKNALKSKGALLQN

The query sequence (length=97) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6gaw:Bo 97 97 1.0000 1.0000 1.0000 1.11e-65 7a5f:j3, 7a5g:j3, 7a5h:j, 7a5i:j3, 7a5j:j, 7a5k:j3, 5aj4:Bo, 8any:j, 6gb2:Bo, 6i9r:j, 3j7y:j, 3j9m:j, 8k2a:Lz, 8k2b:Lz, 7l08:j, 7l20:j, 7nqh:Bo, 7nql:Bo, 7nsh:Bo, 7nsi:Bo, 7nsj:Bo, 6nu2:j, 6nu3:j, 7o9k:j, 7o9m:j, 7odr:j, 7ods:j, 7odt:j, 7of0:j, 7of2:j, 7of3:j, 7of4:j, 7of5:j, 7of6:j, 7of7:j, 7og4:j, 7oi6:j, 7oi7:j, 7oi8:j, 7oi9:j, 7oia:j, 7oib:j, 7oic:j, 7oid:j, 7oie:j, 8oin:Ba, 8oiq:Ba, 8oir:Ba, 8oit:Ba, 5ool:j, 5oom:j, 7pd3:j, 8pk0:j, 7po4:j, 7qh6:j, 7qh7:j, 7qi4:j, 7qi5:j, 7qi6:j, 8qsj:j, 8qu5:j, 6vlz:j, 6vmi:j, 8xt0:Lz, 8xt1:Lz, 8xt2:Lz, 8xt3:Lz, 6ydp:Bo, 6ydw:Bo, 6zm5:j, 6zm6:j, 6zs9:j, 6zsa:j, 6zsb:j, 6zsc:j, 6zsd:j, 6zse:j, 6zsg:j
2 6yxx:Ao 184 33 0.1443 0.0761 0.4242 0.002 7aoi:Ao, 6yxy:Ao
3 6hiv:Ao 183 33 0.1443 0.0765 0.4242 0.005 6hix:Ao
4 7aih:BP 195 32 0.1340 0.0667 0.4062 0.044 7am2:BP, 7ane:BP
5 3t99:A 327 47 0.1340 0.0398 0.2766 0.12 5bya:A, 5byb:A, 5dgh:A, 5dgi:A, 8g9e:A, 4hn2:A, 6n5c:A, 4nzm:A, 4nzn:A, 4nzo:A, 4q4c:A, 4q4d:A, 3t54:A, 3t7a:A, 3t9a:A, 3t9b:A, 3t9c:A, 3t9d:A, 3t9e:A, 3t9f:A
6 8pnt:A 749 49 0.1649 0.0214 0.3265 2.5 8by6:A, 6d0y:C, 1n52:A, 5oo6:D, 5oo6:G, 5oo6:J, 5oo6:M, 5oo6:P, 5oob:I, 5oob:A, 8pmp:A
7 3g5s:A 424 43 0.1443 0.0330 0.3256 3.8 3g5q:A, 3g5r:A
8 4q6w:A 376 20 0.1031 0.0266 0.5000 4.8 4q6w:B
9 5bju:A 340 41 0.1443 0.0412 0.3415 5.9 5bju:B, 5bjv:A, 5bjv:B, 5bjw:A, 5bjw:B, 5bjx:A, 5bjx:B, 5bjy:A, 5bjy:B
10 3pbk:A 555 45 0.1443 0.0252 0.3111 7.0 3pbk:B
11 2gsk:A 590 33 0.1340 0.0220 0.3939 7.9 3m8d:A, 1nqg:A, 1nqh:A, 1ujw:A
12 2guf:A 551 33 0.1340 0.0236 0.3939 7.9 3m8b:A, 1nqe:A, 1nqf:A, 3rgm:A, 3rgn:A
13 3hkz:A 836 22 0.0928 0.0108 0.4091 8.7 3hkz:I, 2y0s:A, 2y0s:W
14 2h79:A 267 30 0.0928 0.0337 0.3000 9.1 2h77:A, 3hzf:A, 3ilz:A, 3jzb:A, 4lnw:A, 4lnx:A, 1nav:A, 7qdt:A, 8rqo:A, 3uvv:A
15 4ayb:A 872 22 0.0928 0.0103 0.4091 9.6 2pmz:A, 2pmz:Q, 4v8s:AW, 4v8s:BA, 2waq:A, 2wb1:A, 2wb1:W

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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