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BioLiP
>protein
AGAGGGELFATHCAGCHPQGGNTVIPEKTLARARREANGIRTVRDVAAYIRNPGPGMPAFGEAMIPPADALKIGEYVVAS
FP

The query sequence (length=82) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3dp5:A 99 80 0.9512 0.7879 0.9750 2.68e-53 3cu4:A, 5mcs:A, 6u97:A
2 7y5e:GN 84 76 0.3293 0.3214 0.3553 1.92e-13 7y5e:G2, 7y7a:G7, 7y7a:Go
3 1gdv:A 85 77 0.3049 0.2941 0.3247 3.30e-12
4 2zbo:A 86 75 0.2683 0.2558 0.2933 2.42e-09 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
5 4gyd:A 86 74 0.2927 0.2791 0.3243 3.90e-09 4gyd:B, 4gyd:C, 4gyd:D, 4gyd:E, 4gyd:F, 4h0j:A, 4h0j:B, 4h0j:C, 4h0j:D, 4h0j:E, 4h0j:F, 4h0k:A, 4h0k:B
6 4eie:A 82 74 0.2805 0.2805 0.3108 5.81e-09 4eif:A
7 3ph2:B 85 58 0.2683 0.2588 0.3793 7.46e-09 2v08:A, 2v08:B
8 3dmi:A 87 78 0.3049 0.2874 0.3205 4.96e-08
9 4kmg:A 88 64 0.2561 0.2386 0.3281 1.56e-07
10 1cyj:A 90 77 0.3171 0.2889 0.3377 1.97e-07 1cyi:A
11 1c6s:A 87 58 0.2439 0.2299 0.3448 3.62e-07 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
12 2dge:A 102 62 0.2805 0.2255 0.3710 1.16e-06 2ce0:A, 2ce1:A, 2dge:C, 2dge:B, 2dge:D, 2v07:A
13 1a2s:A 89 58 0.2683 0.2472 0.3793 3.36e-06 1ced:A, 1ctj:A
14 1ls9:A 91 77 0.2805 0.2527 0.2987 3.72e-06
15 3dr0:A 93 73 0.3171 0.2796 0.3562 1.19e-05 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
16 1c6o:A 89 58 0.2439 0.2247 0.3448 1.75e-05 1c6o:B, 1c6r:A
17 1kib:A 89 81 0.2927 0.2697 0.2963 5.07e-05 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
18 5lo9:A 471 82 0.2805 0.0488 0.2805 0.036 5lo9:B
19 8k9e:A 218 69 0.2195 0.0826 0.2609 0.22 8k9f:A, 8x2j:A
20 6f0k:E 182 90 0.3659 0.1648 0.3333 0.26
21 4o1w:A 79 74 0.2439 0.2532 0.2703 0.53 4o1w:D, 4o1w:B, 4o1w:C, 4o1w:E, 4o1w:F
22 7o38:A 81 62 0.2317 0.2346 0.3065 0.84
23 4yuu:V1 129 54 0.1951 0.1240 0.2963 0.86 4yuu:v1, 4yuu:V2, 4yuu:v2
24 1fcd:C 174 20 0.1220 0.0575 0.5000 1.2 1fcd:D
25 2xkk:C 711 28 0.1463 0.0169 0.4286 2.1 2xkk:A
26 3ihj:A 461 39 0.2073 0.0369 0.4359 2.3
27 3vrd:A 174 21 0.1220 0.0575 0.4762 2.4
28 6rgi:A 92 63 0.2195 0.1957 0.2857 2.5
29 6hwh:i 162 79 0.2805 0.1420 0.2911 3.5 6hwh:j
30 2c8s:A 149 13 0.1098 0.0604 0.6923 4.3
31 6adq:C 223 79 0.2683 0.0987 0.2785 4.3 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
32 3ua3:A 662 21 0.1220 0.0151 0.4762 5.2 3ua3:B
33 7ajq:D 236 22 0.1463 0.0508 0.5455 6.0 7ajq:A, 7ajq:E, 7ajq:B, 7ajq:C
34 7vzg:C 193 25 0.1220 0.0518 0.4000 6.1 7vzr:C
35 4izg:A 369 34 0.1585 0.0352 0.3824 6.2 4e8g:A, 4e8g:B, 4izg:B, 4j1o:A, 4j1o:B
36 7qhm:C 233 15 0.1098 0.0386 0.6000 6.4 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
37 1c52:A 131 22 0.1220 0.0763 0.4545 6.4 1dt1:A, 1foc:A, 1foc:B, 2fwl:A, 1qyz:A, 1r0q:A, 3vnw:A
38 6btm:E 161 18 0.1098 0.0559 0.5000 6.6
39 2xts:D 204 47 0.1707 0.0686 0.2979 6.9 2xts:B
40 3cp5:A 116 13 0.0854 0.0603 0.5385 7.6 6cuk:A, 6cun:A
41 4lmh:D 695 37 0.1463 0.0173 0.3243 7.9 4lmh:A, 4lmh:B, 4lmh:C
42 7e1w:O 223 13 0.0976 0.0359 0.6154 8.2 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
43 6xkw:p 254 77 0.2805 0.0906 0.2987 9.0 6xkx:p, 6xkz:p

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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