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BioLiP
>protein
AAYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAY
PVSDVTIETHKKEELTA

The query sequence (length=97) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1a70:A 97 97 1.0000 1.0000 1.0000 1.49e-68
2 1gaq:B 98 97 0.7423 0.7347 0.7423 4.17e-50 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
3 1pfd:A 96 96 0.7113 0.7188 0.7188 1.36e-49
4 4zho:A 97 95 0.7216 0.7216 0.7368 3.47e-49 4zho:B
5 4zhp:A 98 97 0.7320 0.7245 0.7320 2.64e-48
6 6yac:N 97 97 0.7320 0.7320 0.7320 3.33e-48 6yez:N
7 5auk:A 96 95 0.6701 0.6771 0.6842 8.98e-46 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
8 6xtf:D 96 95 0.6598 0.6667 0.6737 1.29e-45 6xtf:C
9 1awd:A 94 93 0.6392 0.6596 0.6667 3.09e-43
10 1rfk:B 97 97 0.6804 0.6804 0.6804 6.90e-43 3p63:A, 3p63:B, 1rfk:A
11 7s3d:X 97 96 0.6598 0.6598 0.6667 3.00e-42 7s3d:W, 7s3d:x
12 7akt:A 107 93 0.6289 0.5701 0.6559 5.94e-42 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
13 1czp:A 98 97 0.6392 0.6327 0.6392 1.64e-41 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
14 3b2g:A 98 96 0.6392 0.6327 0.6458 6.10e-41 3b2g:B
15 3av8:A 97 96 0.6495 0.6495 0.6562 2.00e-40 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
16 4fxc:A 98 97 0.6186 0.6122 0.6186 5.97e-40
17 7y5e:NN 99 97 0.6186 0.6061 0.6186 1.53e-39 7y5e:N2, 7y7a:N7, 7y7a:No
18 3ab5:A 97 95 0.5979 0.5979 0.6105 3.90e-39 3ab5:B, 3wcq:A
19 6khi:1 98 96 0.6289 0.6224 0.6354 4.24e-39 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
20 5h57:A 97 96 0.6186 0.6186 0.6250 1.01e-38 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
21 1frr:A 95 94 0.5773 0.5895 0.5957 6.49e-37 1frr:B
22 1iue:A 98 95 0.5155 0.5102 0.5263 6.19e-34 1iue:B
23 4itk:A 104 93 0.5155 0.4808 0.5376 1.25e-33
24 6vjv:A 96 95 0.5361 0.5417 0.5474 4.06e-33 6vjv:B
25 8jc1:A 267 95 0.5979 0.2172 0.6105 3.05e-31 8jc1:B, 8jc1:C, 8jc1:D
26 1wri:A 93 94 0.5155 0.5376 0.5319 1.33e-30
27 6iri:A 107 95 0.5052 0.4579 0.5158 4.54e-29
28 4n58:A 266 95 0.4948 0.1805 0.5053 3.48e-24 4n58:B, 4n59:A, 4n59:B
29 1frd:A 98 94 0.4433 0.4388 0.4574 1.79e-18
30 1e0z:A 128 63 0.3093 0.2344 0.4762 1.61e-14 1e10:A
31 1doi:A 128 63 0.2887 0.2188 0.4444 4.84e-12
32 1jq4:A 98 90 0.3093 0.3061 0.3333 2.88e-07
33 1krh:A 337 98 0.2680 0.0772 0.2653 3.45e-07 1krh:B
34 3zyy:X 628 83 0.2474 0.0382 0.2892 6.43e-06 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
35 5ogx:A 333 102 0.2577 0.0751 0.2451 9.21e-05
36 2pia:A 321 53 0.1649 0.0498 0.3019 1.46e-04
37 4wqm:A 326 81 0.2165 0.0644 0.2593 7.62e-04
38 7c3b:B 306 80 0.2371 0.0752 0.2875 0.001
39 7c3b:C 334 80 0.2371 0.0689 0.2875 0.002 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
40 5frt:E 105 53 0.1753 0.1619 0.3208 0.004 5ffi:E
41 5frt:A 119 53 0.1753 0.1429 0.3208 0.005 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
42 1i7h:A 109 53 0.1753 0.1560 0.3208 0.005 1i7h:B, 1i7h:C
43 7ylr:A 326 45 0.1546 0.0460 0.3333 0.047
44 8iuf:1A 352 39 0.1443 0.0398 0.3590 0.051 8j9h:1A, 8j9i:1A, 8j9j:1A
45 6icm:D 87 77 0.1856 0.2069 0.2338 0.20
46 7q5y:A 626 41 0.1546 0.0240 0.3659 0.31 7q5y:G, 7q5y:M, 7q5y:S
47 3kl9:A 340 34 0.1340 0.0382 0.3824 0.75 3kl9:B, 3kl9:C, 3kl9:D, 3kl9:E, 3kl9:F, 3kl9:G, 3kl9:H, 3kl9:I, 3kl9:J, 3kl9:K, 3kl9:L
48 2vhd:A 323 53 0.1649 0.0495 0.3019 1.5 1eb7:A, 2vhd:B
49 7d6v:B 239 32 0.0928 0.0377 0.2812 2.2 7d6x:B
50 1nml:A 316 56 0.1753 0.0538 0.3036 2.2 1rz5:A, 1rz6:A
51 6kbh:A 765 64 0.1443 0.0183 0.2188 6.2
52 7awt:G 907 33 0.1237 0.0132 0.3636 7.3 7nyr:G, 7nyu:G, 7nyv:G, 7nz1:G, 7p61:G, 7p62:G, 7p63:G, 7p64:G, 7p69:G, 7p7c:G, 7p7e:G, 7p7j:G, 7p7k:G, 7p7l:G, 7p7m:G, 7z7r:G, 7z7s:G, 7z7t:G, 7z7v:G, 7z80:G, 7z83:G, 7z84:G, 7zc5:G, 7zci:G
53 2rmp:A 358 23 0.1031 0.0279 0.4348 7.9
54 6laa:A 753 63 0.1134 0.0146 0.1746 8.8 6gii:A, 6ldl:A
55 8oh5:C 1172 30 0.1237 0.0102 0.4000 9.1 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
56 4aqt:A 356 55 0.1546 0.0421 0.2727 9.8 8dmk:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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