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BioLiP
>protein
AAAKELEESSFRKTFEDYLHNVVFVPSPSR

The query sequence (length=30) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7md5:M 30 30 1.0000 1.0000 1.0000 3.78e-16 7md5:N
2 8guy:F 835 27 0.8333 0.0299 0.9259 4.01e-12 6ce7:P, 6ce9:M, 6ce9:P, 6ceb:M, 6ceb:P, 8guy:E, 6hn5:E, 5j3h:E, 7kd6:E, 7kd6:K, 7kd6:Q, 7kd6:W, 5kqv:E, 5kqv:F, 7mqo:F, 7mqo:E, 7mqr:E, 7mqr:F, 4oga:E, 7pg0:B, 7pg2:B, 7pg3:B, 7pg4:B, 7qid:C, 7sl3:A, 7sl3:B, 6sof:A, 6sof:C, 7u6e:F, 7u6e:E, 6vep:E, 6vep:K, 6vep:Q, 6vep:W, 6veq:K, 6veq:E, 3w11:E, 3w12:E, 3w13:E, 4xss:E, 4xst:E, 7yq3:F, 7yq3:E, 7yq4:E, 7yq4:F, 7yq5:F
3 7sl6:A 819 27 0.8333 0.0305 0.9259 4.47e-12 7mqs:F, 7mqs:E, 7sl1:A, 7sl1:B, 7sl2:A, 7sl2:B, 7sl6:B, 7sl7:A, 7sl7:B
4 6hn5:F 323 25 0.8000 0.0743 0.9600 2.82e-11
5 7sl4:A 786 23 0.7667 0.0293 1.0000 2.37e-10 8dtm:B
6 6jk8:A 823 18 0.3667 0.0134 0.6111 8.05e-04 1igr:A, 7v3p:B
7 6jk8:B 801 16 0.2667 0.0100 0.5000 0.98
8 6ycx:B 817 16 0.2667 0.0098 0.5000 3.3 8a12:A, 8cdm:A, 8cdq:A, 6i7e:A, 6ycx:A, 6ycy:A, 6ycz:A
9 8ijg:C 250 24 0.3667 0.0440 0.4583 6.1 8ij6:A, 8ij6:B, 8ij6:C, 8ij6:D, 8ijg:A, 8ijg:B, 8ijg:D
10 6iv9:A 874 16 0.3000 0.0103 0.5625 8.3 6iv8:A, 6iv8:C
11 4bjr:A 500 26 0.3000 0.0180 0.3462 8.4 4b0t:A, 4b0t:B, 4bjr:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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