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BioLiP Library
Download all results in tab-seperated text for 26 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4cev:A (2.7) BS01 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    2 4cev:A (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    3 4cev:A (2.7) BS03 ORN 3.5.3.1 GO:0000050 ... P53608 10196128
    4 4cev:A (2.7) BS04 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    5 4cev:B (2.7) BS01 ORN 3.5.3.1 GO:0000050 ... P53608 10196128
    6 4cev:B (2.7) BS02 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    7 4cev:B (2.7) BS03 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    8 4cev:B (2.7) BS04 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    9 4cev:B (2.7) BS05 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    10 4cev:C (2.7) BS01 ORN 3.5.3.1 GO:0000050 ... P53608 10196128
    11 4cev:C (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    12 4cev:C (2.7) BS03 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    13 4cev:C (2.7) BS04 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    14 4cev:D (2.7) BS01 ORN 3.5.3.1 GO:0000050 ... P53608 10196128
    15 4cev:D (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    16 4cev:D (2.7) BS03 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    17 4cev:D (2.7) BS04 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    18 4cev:E (2.7) BS01 ORN 3.5.3.1 GO:0000050 ... P53608 10196128
    19 4cev:E (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    20 4cev:E (2.7) BS03 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    21 4cev:E (2.7) BS04 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    22 4cev:F (2.7) BS01 ORN 3.5.3.1 GO:0000050 ... P53608 10196128
    23 4cev:F (2.7) BS02 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    24 4cev:F (2.7) BS03 MN 3.5.3.1 GO:0000050 ... P53608 10196128
    25 4cev:F (2.7) BS04 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    26 4cev:F (2.7) BS05 GAI 3.5.3.1 GO:0000050 ... P53608 10196128
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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