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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8rt8:A (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    2 8rt8:B (3.05) BS01 peptide N/A N/A O50336 38886579
    3 8rt8:D (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    4 8rt8:E (3.05) BS01 peptide N/A N/A O50336 38886579
    5 8rt8:E (3.05) BS02 peptide N/A N/A O50336 38886579
    6 8rt8:G (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    7 8rt8:H (3.05) BS01 peptide N/A N/A O50336 38886579
    8 8rt8:J (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    9 8rt8:K (3.05) BS01 peptide N/A N/A O50336 38886579
    10 8rt8:M (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    11 8rt8:N (3.05) BS01 peptide N/A N/A O50336 38886579
    12 8rt8:P (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    13 8rt8:Q (3.05) BS01 peptide N/A N/A O50336 38886579
    14 8rt8:S (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    15 8rt8:T (3.05) BS01 peptide N/A N/A O50336 38886579
    16 8rt8:T (3.05) BS02 peptide N/A N/A O50336 38886579
    17 8rt8:V (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    18 8rt8:W (3.05) BS01 peptide N/A N/A O50336 38886579
    19 8rt8:Y (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    20 8rt8:Z (3.05) BS01 peptide N/A N/A O50336 38886579
    21 8rt8:b (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    22 8rt8:c (3.05) BS01 peptide N/A N/A O50336 38886579
    23 8rt8:e (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    24 8rt8:f (3.05) BS01 peptide N/A N/A O50336 38886579
    25 8rt8:h (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    26 8rt8:i (3.05) BS01 peptide N/A N/A O50336 38886579
    27 8rt8:k (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    28 8rt8:l (3.05) BS01 peptide N/A N/A O50336 38886579
    29 8rt8:n (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    30 8rt8:o (3.05) BS01 peptide N/A N/A O50336 38886579
    31 8rt8:v (3.05) BS01 peptide N/A N/A O50336 38886579
    32 8rt8:z (3.05) BS01 peptide N/A N/A O50336 38886579
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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