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BioLiP
Download all results in tab-seperated text for 45 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8qo0:AV (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    2 8qo0:AW (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    3 8qo0:Ac (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    4 8qo0:Am (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    5 8qo0:Aq (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    6 8qo0:Ar (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    7 8qo0:At (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    8 8qo0:Av (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    9 8qo0:Ax (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    10 8qo0:BJ (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    11 8qo0:BT (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    12 8qo0:BW (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    13 8qo0:BX (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    14 8qo0:Bc (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    15 8qo0:FR (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    16 8qo0:Fb (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    17 8qo0:Ff (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    18 8qo0:Fg (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    19 8qo0:Fi (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    20 8qo0:Fm (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    21 8qo0:GA (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    22 8qo0:KG (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    23 8qo0:KQ (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    24 8qo0:KV (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    25 8qo0:KX (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    26 8qo0:Kb (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    27 8qo0:Kq (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    28 8qo0:Kz (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    29 8qo0:LD (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    30 8qo0:Ov (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    31 8qo0:PF (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    32 8qo0:PK (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    33 8qo0:PM (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    34 8qo0:PO (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    35 8qo0:PQ (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    36 8qo0:Pb (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    37 8qo0:Ps (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    38 8qo0:TT (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    39 8qo0:Tk (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    40 8qo0:Tu (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    41 8qo0:Tz (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    42 8qo0:UB (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    43 8qo0:UF (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    44 8qo0:UK (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    45 8qo0:UW (10.62) BS01 peptide ? N/A Q9R3U6 37866476
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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