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BioLiP
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8fxp:0G (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    2 8fxp:0H (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    3 8fxp:1 (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    4 8fxp:1 (4.04) BS02 peptide ? N/A A0A482MFS0 37684529
    5 8fxp:2 (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    6 8fxp:3 (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    7 8fxp:5 (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    8 8fxp:7 (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    9 8fxp:9 (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    10 8fxp:AA (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    11 8fxp:AA (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    12 8fxp:AB (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    13 8fxp:AB (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    14 8fxp:AC (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    15 8fxp:AC (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    16 8fxp:AD (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    17 8fxp:AE (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    18 8fxp:AF (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    19 8fxp:AF (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    20 8fxp:AG (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    21 8fxp:AG (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    22 8fxp:AH (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    23 8fxp:AI (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    24 8fxp:AJ (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    25 8fxp:AJ (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    26 8fxp:AJ (4.04) BS03 peptide ? N/A A0A482MFS6 37684529
    27 8fxp:AK (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    28 8fxp:AL (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    29 8fxp:AM (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    30 8fxp:AN (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    31 8fxp:c (4.04) BS01 peptide N/A N/A N/A 37684529
    32 8fxp:d (4.04) BS01 peptide N/A N/A N/A 37684529
    33 8fxp:g (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    34 8fxp:h (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    35 8fxp:i (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    36 8fxp:i (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    37 8fxp:j (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    38 8fxp:j (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    39 8fxp:k (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    40 8fxp:k (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    41 8fxp:l (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    42 8fxp:m (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    43 8fxp:n (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    44 8fxp:o (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    45 8fxp:r (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    46 8fxp:r (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    47 8fxp:s (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    48 8fxp:s (4.04) BS02 peptide ? N/A A0A482MFS0 37684529
    49 8fxp:t (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    50 8fxp:t (4.04) BS02 peptide ? N/A A0A482MFS0 37684529
    51 8fxp:u (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    52 8fxp:v (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    53 8fxp:w (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    54 8fxp:w (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    55 8fxp:x (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    56 8fxp:x (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    57 8fxp:y (4.04) BS01 peptide ? N/A A0A482MFS6 37684529
    58 8fxp:y (4.04) BS02 peptide ? N/A A0A482MFS6 37684529
    59 8fxp:z (4.04) BS01 peptide ? N/A A0A482MFS0 37684529
    60 8fxp:z (4.04) BS02 peptide ? N/A A0A482MFS0 37684529
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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