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BioLiP
Download all results in tab-seperated text for 48 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8fwi:A (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    2 8fwi:A (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    3 8fwi:A (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    4 8fwi:A (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    5 8fwi:B (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    6 8fwi:B (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    7 8fwi:B (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    8 8fwi:B (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    9 8fwi:C (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    10 8fwi:C (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    11 8fwi:C (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    12 8fwi:C (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    13 8fwi:D (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    14 8fwi:D (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    15 8fwi:D (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    16 8fwi:D (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    17 8fwi:E (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    18 8fwi:E (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    19 8fwi:E (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    20 8fwi:E (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    21 8fwi:F (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    22 8fwi:F (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    23 8fwi:F (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    24 8fwi:F (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    25 8fwi:G (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    26 8fwi:G (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    27 8fwi:G (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    28 8fwi:G (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    29 8fwi:H (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    30 8fwi:H (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    31 8fwi:H (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    32 8fwi:H (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    33 8fwi:I (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    34 8fwi:I (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    35 8fwi:I (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    36 8fwi:I (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    37 8fwi:J (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    38 8fwi:J (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    39 8fwi:J (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    40 8fwi:J (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    41 8fwi:K (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    42 8fwi:K (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    43 8fwi:K (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    44 8fwi:K (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    45 8fwi:L (2.9) BS01 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    46 8fwi:L (2.9) BS02 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    47 8fwi:L (2.9) BS03 ATP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    48 8fwi:L (2.9) BS04 ADP 2.7.11.1 GO:0005524 ... B9KWX8 36949197
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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