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BioLiP
Download all results in tab-seperated text for 102 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7zdi:A (2.9) BS01 BCL ? GO:0005886 ... P35102 36251992
    2 7zdi:A (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    3 7zdi:A (2.9) BS03 IRM ? GO:0005886 ... P35102 36251992
    4 7zdi:A (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    5 7zdi:A (2.9) BS05 IRM ? GO:0005886 ... P35102 36251992
    6 7zdi:A (2.9) BS06 BCL ? GO:0005886 ... P35102 36251992
    7 7zdi:B (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    8 7zdi:B (2.9) BS02 BCL ? GO:0005886 ... P35107 36251992
    9 7zdi:B (2.9) BS03 IRM ? GO:0005886 ... P35107 36251992
    10 7zdi:B (2.9) BS04 BCL ? GO:0005886 ... P35107 36251992
    11 7zdi:B (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    12 7zdi:C (2.9) BS01 IRM ? GO:0005886 ... P35102 36251992
    13 7zdi:C (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    14 7zdi:C (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    15 7zdi:C (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    16 7zdi:C (2.9) BS05 BCL ? GO:0005886 ... P35102 36251992
    17 7zdi:C (2.9) BS06 IRM ? GO:0005886 ... P35102 36251992
    18 7zdi:D (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    19 7zdi:D (2.9) BS02 IRM ? GO:0005886 ... P35107 36251992
    20 7zdi:D (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    21 7zdi:D (2.9) BS04 BCL ? GO:0005886 ... P35107 36251992
    22 7zdi:D (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    23 7zdi:E (2.9) BS01 IRM ? GO:0005886 ... P35102 36251992
    24 7zdi:E (2.9) BS02 BCL ? GO:0005886 ... P35102 36251992
    25 7zdi:E (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    26 7zdi:E (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    27 7zdi:E (2.9) BS05 IRM ? GO:0005886 ... P35102 36251992
    28 7zdi:E (2.9) BS06 IRM ? GO:0005886 ... P35102 36251992
    29 7zdi:F (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    30 7zdi:F (2.9) BS02 BCL ? GO:0005886 ... P35107 36251992
    31 7zdi:F (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    32 7zdi:F (2.9) BS04 IRM ? GO:0005886 ... P35107 36251992
    33 7zdi:G (2.9) BS01 BCL ? GO:0005886 ... P35102 36251992
    34 7zdi:G (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    35 7zdi:G (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    36 7zdi:G (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    37 7zdi:G (2.9) BS05 IRM ? GO:0005886 ... P35102 36251992
    38 7zdi:G (2.9) BS06 IRM ? GO:0005886 ... P35102 36251992
    39 7zdi:H (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    40 7zdi:H (2.9) BS02 BCL ? GO:0005886 ... P35107 36251992
    41 7zdi:H (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    42 7zdi:H (2.9) BS04 IRM ? GO:0005886 ... P35107 36251992
    43 7zdi:I (2.9) BS01 BCL ? GO:0005886 ... P35102 36251992
    44 7zdi:I (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    45 7zdi:I (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    46 7zdi:I (2.9) BS04 IRM ? GO:0005886 ... P35102 36251992
    47 7zdi:I (2.9) BS05 IRM ? GO:0005886 ... P35102 36251992
    48 7zdi:I (2.9) BS06 BCL ? GO:0005886 ... P35102 36251992
    49 7zdi:J (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    50 7zdi:J (2.9) BS02 BCL ? GO:0005886 ... P35107 36251992
    51 7zdi:J (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    52 7zdi:J (2.9) BS04 IRM ? GO:0005886 ... P35107 36251992
    53 7zdi:J (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    54 7zdi:K (2.9) BS01 IRM ? GO:0005886 ... P35102 36251992
    55 7zdi:K (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    56 7zdi:K (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    57 7zdi:K (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    58 7zdi:K (2.9) BS05 IRM ? GO:0005886 ... P35102 36251992
    59 7zdi:K (2.9) BS06 BCL ? GO:0005886 ... P35102 36251992
    60 7zdi:L (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    61 7zdi:L (2.9) BS02 IRM ? GO:0005886 ... P35107 36251992
    62 7zdi:L (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    63 7zdi:L (2.9) BS04 BCL ? GO:0005886 ... P35107 36251992
    64 7zdi:L (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    65 7zdi:M (2.9) BS01 IRM ? GO:0005886 ... P35102 36251992
    66 7zdi:M (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    67 7zdi:M (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    68 7zdi:M (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    69 7zdi:M (2.9) BS05 IRM ? GO:0005886 ... P35102 36251992
    70 7zdi:M (2.9) BS06 BCL ? GO:0005886 ... P35102 36251992
    71 7zdi:N (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    72 7zdi:N (2.9) BS02 IRM ? GO:0005886 ... P35107 36251992
    73 7zdi:N (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    74 7zdi:N (2.9) BS04 BCL ? GO:0005886 ... P35107 36251992
    75 7zdi:N (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    76 7zdi:O (2.9) BS01 IRM ? GO:0005886 ... P35102 36251992
    77 7zdi:O (2.9) BS02 BCL ? GO:0005886 ... P35102 36251992
    78 7zdi:O (2.9) BS03 BCL ? GO:0005886 ... P35102 36251992
    79 7zdi:O (2.9) BS04 IRM ? GO:0005886 ... P35102 36251992
    80 7zdi:O (2.9) BS05 BCL ? GO:0005886 ... P35102 36251992
    81 7zdi:P (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    82 7zdi:P (2.9) BS02 IRM ? GO:0005886 ... P35107 36251992
    83 7zdi:P (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    84 7zdi:P (2.9) BS04 BCL ? GO:0005886 ... P35107 36251992
    85 7zdi:P (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    86 7zdi:Q (2.9) BS01 IRM ? GO:0005886 ... P35102 36251992
    87 7zdi:Q (2.9) BS02 IRM ? GO:0005886 ... P35102 36251992
    88 7zdi:Q (2.9) BS03 IRM ? GO:0005886 ... P35102 36251992
    89 7zdi:Q (2.9) BS04 BCL ? GO:0005886 ... P35102 36251992
    90 7zdi:Q (2.9) BS05 BCL ? GO:0005886 ... P35102 36251992
    91 7zdi:Q (2.9) BS06 BCL ? GO:0005886 ... P35102 36251992
    92 7zdi:R (2.9) BS01 BCL ? GO:0005886 ... P35107 36251992
    93 7zdi:R (2.9) BS02 IRM ? GO:0005886 ... P35107 36251992
    94 7zdi:R (2.9) BS03 BCL ? GO:0005886 ... P35107 36251992
    95 7zdi:R (2.9) BS04 BCL ? GO:0005886 ... P35107 36251992
    96 7zdi:R (2.9) BS05 BCL ? GO:0005886 ... P35107 36251992
    97 7zdi:S (2.9) BS01 BCL ? N/A Q6N9P5 36251992
    98 7zdi:S (2.9) BS02 BCL ? N/A Q6N9P5 36251992
    99 7zdi:S (2.9) BS03 BCL ? N/A Q6N9P5 36251992
    100 7zdi:S (2.9) BS04 BCL ? N/A Q6N9P5 36251992
    101 7zdi:S (2.9) BS05 BCL ? N/A Q6N9P5 36251992
    102 7zdi:S (2.9) BS06 BCL ? N/A Q6N9P5 36251992
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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