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BioLiP
Download all results in tab-seperated text for 305 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7vy2:01 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    2 7vy2:01 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    3 7vy2:01 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    4 7vy2:01 (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    5 7vy2:01 (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    6 7vy2:01 (2.75) BS06 BCL N/A GO:0016020 ... N/A 35393413
    7 7vy2:02 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    8 7vy2:02 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    9 7vy2:02 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    10 7vy2:02 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    11 7vy2:03 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    12 7vy2:03 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    13 7vy2:03 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    14 7vy2:03 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    15 7vy2:03 (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    16 7vy2:03 (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    17 7vy2:04 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    18 7vy2:04 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    19 7vy2:04 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    20 7vy2:05 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    21 7vy2:05 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    22 7vy2:05 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    23 7vy2:05 (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    24 7vy2:05 (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    25 7vy2:06 (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    26 7vy2:06 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    27 7vy2:06 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    28 7vy2:06 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    29 7vy2:07 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    30 7vy2:07 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    31 7vy2:07 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    32 7vy2:08 (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    33 7vy2:08 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    34 7vy2:08 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    35 7vy2:1 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    36 7vy2:1 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    37 7vy2:1 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    38 7vy2:1 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    39 7vy2:1 (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    40 7vy2:2 (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    41 7vy2:2 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    42 7vy2:2 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    43 7vy2:2 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    44 7vy2:2 (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    45 7vy2:3 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    46 7vy2:3 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    47 7vy2:3 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    48 7vy2:3 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    49 7vy2:3 (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    50 7vy2:4 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    51 7vy2:4 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    52 7vy2:4 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    53 7vy2:4 (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    54 7vy2:5 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    55 7vy2:5 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    56 7vy2:5 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    57 7vy2:5 (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    58 7vy2:5 (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    59 7vy2:6 (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    60 7vy2:6 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    61 7vy2:6 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    62 7vy2:7 (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    63 7vy2:7 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    64 7vy2:8 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    65 7vy2:8 (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    66 7vy2:8 (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    67 7vy2:A (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    68 7vy2:A (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    69 7vy2:A (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    70 7vy2:A (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    71 7vy2:A (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    72 7vy2:A (2.75) BS06 U10 N/A GO:0016020 ... N/A 35393413
    73 7vy2:B (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    74 7vy2:B (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    75 7vy2:B (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    76 7vy2:D (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    77 7vy2:D (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    78 7vy2:D (2.75) BS03 U10 N/A GO:0016020 ... N/A 35393413
    79 7vy2:D (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    80 7vy2:D (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    81 7vy2:D (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    82 7vy2:E (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    83 7vy2:E (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    84 7vy2:E (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    85 7vy2:E (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    86 7vy2:F (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    87 7vy2:F (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    88 7vy2:F (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    89 7vy2:F (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    90 7vy2:F (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    91 7vy2:F (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    92 7vy2:G (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    93 7vy2:G (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    94 7vy2:G (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    95 7vy2:G (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    96 7vy2:I (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    97 7vy2:I (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    98 7vy2:I (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    99 7vy2:I (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    100 7vy2:I (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    101 7vy2:I (2.75) BS06 BCL N/A GO:0016020 ... N/A 35393413
    102 7vy2:I (2.75) BS07 BCL N/A GO:0016020 ... N/A 35393413
    103 7vy2:J (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    104 7vy2:J (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    105 7vy2:J (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    106 7vy2:J (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    107 7vy2:J (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    108 7vy2:K (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    109 7vy2:K (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    110 7vy2:K (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    111 7vy2:K (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    112 7vy2:K (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    113 7vy2:K (2.75) BS06 BCL N/A GO:0016020 ... N/A 35393413
    114 7vy2:L (2.75) BS01 BCL N/A GO:0009772 ... N/A 35393413
    115 7vy2:L (2.75) BS02 BPH N/A GO:0009772 ... N/A 35393413
    116 7vy2:L (2.75) BS03 U10 N/A GO:0009772 ... N/A 35393413
    117 7vy2:L (2.75) BS04 U10 N/A GO:0009772 ... N/A 35393413
    118 7vy2:L (2.75) BS05 BCL N/A GO:0009772 ... N/A 35393413
    119 7vy2:L (2.75) BS06 BCL N/A GO:0009772 ... N/A 35393413
    120 7vy2:L (2.75) BS07 BPH N/A GO:0009772 ... N/A 35393413
    121 7vy2:L (2.75) BS08 FE N/A GO:0009772 ... N/A 35393413
    122 7vy2:L (2.75) BS09 U10 N/A GO:0009772 ... N/A 35393413
    123 7vy2:L (2.75) BS10 U10 N/A GO:0009772 ... N/A 35393413
    124 7vy2:M (2.75) BS01 BPH N/A GO:0009772 ... N/A 35393413
    125 7vy2:M (2.75) BS02 U10 N/A GO:0009772 ... N/A 35393413
    126 7vy2:M (2.75) BS03 BCL N/A GO:0009772 ... N/A 35393413
    127 7vy2:M (2.75) BS04 BCL N/A GO:0009772 ... N/A 35393413
    128 7vy2:M (2.75) BS05 BCL N/A GO:0009772 ... N/A 35393413
    129 7vy2:M (2.75) BS06 BPH N/A GO:0009772 ... N/A 35393413
    130 7vy2:M (2.75) BS07 FE N/A GO:0009772 ... N/A 35393413
    131 7vy2:M (2.75) BS08 U10 N/A GO:0009772 ... N/A 35393413
    132 7vy2:M (2.75) BS09 SPO N/A GO:0009772 ... N/A 35393413
    133 7vy2:N (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    134 7vy2:N (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    135 7vy2:N (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    136 7vy2:N (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    137 7vy2:O (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    138 7vy2:O (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    139 7vy2:O (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    140 7vy2:O (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    141 7vy2:O (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    142 7vy2:P (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    143 7vy2:P (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    144 7vy2:P (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    145 7vy2:P (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    146 7vy2:P (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    147 7vy2:Q (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    148 7vy2:Q (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    149 7vy2:Q (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    150 7vy2:Q (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    151 7vy2:Q (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    152 7vy2:R (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    153 7vy2:R (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    154 7vy2:R (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    155 7vy2:R (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    156 7vy2:S (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    157 7vy2:S (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    158 7vy2:S (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    159 7vy2:S (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    160 7vy2:S (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    161 7vy2:T (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    162 7vy2:T (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    163 7vy2:T (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    164 7vy2:V (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    165 7vy2:V (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    166 7vy2:V (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    167 7vy2:V (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    168 7vy2:V (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    169 7vy2:W (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    170 7vy2:W (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    171 7vy2:W (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    172 7vy2:W (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    173 7vy2:X (2.75) BS01 SPO N/A N/A N/A 35393413
    174 7vy2:Y (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    175 7vy2:Y (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    176 7vy2:Y (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    177 7vy2:Y (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    178 7vy2:Y (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    179 7vy2:Y (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    180 7vy2:Z (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    181 7vy2:Z (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    182 7vy2:Z (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    183 7vy2:Z (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    184 7vy2:Z (2.75) BS05 BCL N/A GO:0016020 ... N/A 35393413
    185 7vy2:a (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    186 7vy2:a (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    187 7vy2:a (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    188 7vy2:a (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    189 7vy2:a (2.75) BS05 U10 N/A GO:0016020 ... N/A 35393413
    190 7vy2:a (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    191 7vy2:b (2.75) BS01 BCL N/A GO:0016020 ... N/A 35393413
    192 7vy2:b (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    193 7vy2:b (2.75) BS03 BCL N/A GO:0016020 ... N/A 35393413
    194 7vy2:d (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    195 7vy2:d (2.75) BS02 BCL N/A GO:0016020 ... N/A 35393413
    196 7vy2:d (2.75) BS03 U10 N/A GO:0016020 ... N/A 35393413
    197 7vy2:d (2.75) BS04 BCL N/A GO:0016020 ... N/A 35393413
    198 7vy2:d (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    199 7vy2:d (2.75) BS06 BCL N/A GO:0016020 ... N/A 35393413
    200 7vy2:d (2.75) BS07 SPO N/A GO:0016020 ... N/A 35393413
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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